Miyakogusa Predicted Gene
- Lj4g3v3014330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3014330.1 tr|I4C326|I4C326_DESTA 30S ribosomal protein S6
OS=Desulfomonile tiedjei (strain ATCC 49306 / DSM
67,32.35,0.00000002,Ribosomal protein S6,Ribosomal protein S6;
Ribosomal_S6,Ribosomal protein S6, plastid/chloroplast; n,CUFF.52054.1
(630 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59994 similar to UniRef100_A7QU48 Cluster: Chromosome... 1249 0.0
gnl|LJGI|TC61959 similar to UniRef100_A7QU48 Cluster: Chromosome... 773 0.0
>gnl|LJGI|TC59994 similar to UniRef100_A7QU48 Cluster: Chromosome chr2 scaffold_176,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_176, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 891
Score = 1249 bits (630), Expect = 0.0
Identities = 630/630 (100%)
Strand = Plus / Plus
Query: 1 atggcatcaacttccctcaattcaatccctcttacatcttcttcccttaacattcctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atggcatcaacttccctcaattcaatccctcttacatcttcttcccttaacattcctcat 105
Query: 61 tgctactccattccctcctctaccttcttctcttctccaatccgcgcattcaaacctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tgctactccattccctcctctaccttcttctcttctccaatccgcgcattcaaacctctg 165
Query: 121 tttgctgaatcaaaatcccactgttaccagaagaaaaacgattctgtcttctctgtcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tttgctgaatcaaaatcccactgttaccagaagaaaaacgattctgtcttctctgtcaaa 225
Query: 181 gcccaaaccctagacttcactgattcattcttcgaaggtggattagggtcggaagatgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gcccaaaccctagacttcactgattcattcttcgaaggtggattagggtcggaagatgac 285
Query: 241 ctgaattcttccggaactggtcttactgctactgaggagaaggaggaaccgcaatgccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctgaattcttccggaactggtcttactgctactgaggagaaggaggaaccgcaatgccca 345
Query: 301 cccggacttaggcagtacgaaacaatggcggttttgagacctgatatgtctgaggatgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cccggacttaggcagtacgaaacaatggcggttttgagacctgatatgtctgaggatgag 405
Query: 361 cgactcgcactcacccagaagtacgaggagctgcttgttgctggaggtggcatgtatgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cgactcgcactcacccagaagtacgaggagctgcttgttgctggaggtggcatgtatgta 465
Query: 421 gaggtttttaacagaggagttattccactagcatatagcatcaagaagaaaaacaaggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaggtttttaacagaggagttattccactagcatatagcatcaagaagaaaaacaaggca 525
Query: 481 ggagagaccaacacatatttggatggaatctaccttctatacacctacttcactaagccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ggagagaccaacacatatttggatggaatctaccttctatacacctacttcactaagccc 585
Query: 541 gaatctatagtcgctcttgaggagacactcttggcggacgatgatgttctgcgatcaacg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gaatctatagtcgctcttgaggagacactcttggcggacgatgatgttctgcgatcaacg 645
Query: 601 accttcaaaatcaagaaaaggaagtattag 630
||||||||||||||||||||||||||||||
Sbjct: 646 accttcaaaatcaagaaaaggaagtattag 675
>gnl|LJGI|TC61959 similar to UniRef100_A7QU48 Cluster: Chromosome chr2 scaffold_176,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_176, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (69%)
Length = 796
Score = 773 bits (390), Expect = 0.0
Identities = 390/390 (100%)
Strand = Plus / Plus
Query: 1 atggcatcaacttccctcaattcaatccctcttacatcttcttcccttaacattcctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 atggcatcaacttccctcaattcaatccctcttacatcttcttcccttaacattcctcat 97
Query: 61 tgctactccattccctcctctaccttcttctcttctccaatccgcgcattcaaacctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 tgctactccattccctcctctaccttcttctcttctccaatccgcgcattcaaacctctg 157
Query: 121 tttgctgaatcaaaatcccactgttaccagaagaaaaacgattctgtcttctctgtcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tttgctgaatcaaaatcccactgttaccagaagaaaaacgattctgtcttctctgtcaaa 217
Query: 181 gcccaaaccctagacttcactgattcattcttcgaaggtggattagggtcggaagatgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gcccaaaccctagacttcactgattcattcttcgaaggtggattagggtcggaagatgac 277
Query: 241 ctgaattcttccggaactggtcttactgctactgaggagaaggaggaaccgcaatgccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ctgaattcttccggaactggtcttactgctactgaggagaaggaggaaccgcaatgccca 337
Query: 301 cccggacttaggcagtacgaaacaatggcggttttgagacctgatatgtctgaggatgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cccggacttaggcagtacgaaacaatggcggttttgagacctgatatgtctgaggatgag 397
Query: 361 cgactcgcactcacccagaagtacgaggag 390
||||||||||||||||||||||||||||||
Sbjct: 398 cgactcgcactcacccagaagtacgaggag 427
Score = 418 bits (211), Expect = e-116
Identities = 211/211 (100%)
Strand = Plus / Plus
Query: 420 agaggtttttaacagaggagttattccactagcatatagcatcaagaagaaaaacaaggc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 agaggtttttaacagaggagttattccactagcatatagcatcaagaagaaaaacaaggc 485
Query: 480 aggagagaccaacacatatttggatggaatctaccttctatacacctacttcactaagcc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aggagagaccaacacatatttggatggaatctaccttctatacacctacttcactaagcc 545
Query: 540 cgaatctatagtcgctcttgaggagacactcttggcggacgatgatgttctgcgatcaac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 cgaatctatagtcgctcttgaggagacactcttggcggacgatgatgttctgcgatcaac 605
Query: 600 gaccttcaaaatcaagaaaaggaagtattag 630
|||||||||||||||||||||||||||||||
Sbjct: 606 gaccttcaaaatcaagaaaaggaagtattag 636