Miyakogusa Predicted Gene
- Lj4g3v3014300.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3014300.1 tr|B9GL32|B9GL32_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1066621 PE=3
SV=1,83.45,0,seg,NULL; fabF: beta-ketoacyl-acyl-carrier-protein
synthase ,3-oxoacyl-[acyl-carrier-protein] syntha,CUFF.52060.1
(1350 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63733 similar to UniRef100_O82520 Cluster: 3-oxoacyl-... 932 0.0
gnl|LJGI|TC61036 similar to UniRef100_O82520 Cluster: 3-oxoacyl-... 819 0.0
gnl|LJGI|TC77388 similar to UniRef100_O82520 Cluster: 3-oxoacyl-... 204 1e-51
gnl|LJGI|TC73418 similar to UniRef100_O82520 Cluster: 3-oxoacyl-... 190 2e-47
gnl|LJGI|TC74266 similar to UniRef100_A9S8R9 Cluster: Predicted ... 188 6e-47
gnl|LJGI|TC74849 similar to UniRef100_O82520 Cluster: 3-oxoacyl-... 121 1e-26
gnl|LJGI|AV780186 similar to UniRef100_O82520 Cluster: 3-oxoacyl... 119 5e-26
gnl|LJGI|TC76634 similar to UniRef100_O24078 Cluster: Protein ph... 84 3e-15
gnl|LJGI|BW597832 similar to UniRef100_Q9M507 Cluster: Beta-keto... 60 4e-08
gnl|LJGI|TC64517 homologue to UniRef100_Q9M508 Cluster: Beta-ket... 60 4e-08
>gnl|LJGI|TC63733 similar to UniRef100_O82520 Cluster: 3-oxoacyl-[acyl-carrier-protein]
synthase; n=1; Capsicum chinense|Rep:
3-oxoacyl-[acyl-carrier-protein] synthase - Capsicum
chinense (Scotch bonnet) (Bonnet pepper), partial (40%)
Length = 816
Score = 932 bits (470), Expect = 0.0
Identities = 575/610 (94%)
Strand = Plus / Plus
Query: 741 gaggaatgaagaccccaagaaggcttcaagaccatgggacaaagatcgcgatggttttgt 800
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 gaggaatgaggaccccaagaaggcttcaagaccatgggacaaagatcgtgatggttttgt 60
Query: 801 cttgggtgaaggctctggtgtgctggtaatggagagcttggagagtgcaacaaaaagagg 860
| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 61 catgggtgaaggctctggcgtgctgataatggagagcttggagagtgcaacaaaaagggg 120
Query: 861 agccacaataatagcagaatatctggggggtgccataacatgtgatgctcatcacatgac 920
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 121 agccacgataatagcagaatatctggggggtgccataacttgtgatgctcatcacatgac 180
Query: 921 aaacccagggcctgatggactaggagtttcaatttgcatatggaagagtttagaaaatgc 980
| ||| || | |||||||| ||||||||| ||||||| ||||||||||| || ||||
Sbjct: 181 tgatccaaggtcggatggacttggagtttcatcttgcataaggaagagtttacaagatgc 240
Query: 981 tggggtttcccctgaagaggtgacctatatcaatgctcatgccacatcaacactagcagg 1040
||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||
Sbjct: 241 tggggtttcccctgaagaggtgaactatatcaatgctcatgccacttcaacactggcagg 300
Query: 1041 tgacctggctgaggttaatgcaatcaaacaagtttttaaggacacatcagaattgaaaat 1100
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgacttggctgaggttaatgcaatcaaacaagtttttaaggacacatcagaattgaaaat 360
Query: 1101 gaatgccactaagtcaatgattggtcatggtcttggggcttctggtggcttggaagctat 1160
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 361 gaatggcactaagtcaatgattggtcatggtcttggggcttctggtggtttggaagctat 420
Query: 1161 agcaactatcaaagcaataacaactggctggttgcacccaaccattaaccaagataactt 1220
||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 421 agcaactatcaaagcgataacaactggctggttgcatccaaccattaaccaagataacat 480
Query: 1221 ggaggattatgttacaattgacaccgtccctaacgtcaagaagcagcatgaagttaatgt 1280
||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 481 tgaggaggatgttacaattgacactgtccctaatgtcaagaagcagcatgaagttaatgt 540
Query: 1281 tgctatctccaactcatttgggttcggtggacacaattcagttgttgtctttgctccatt 1340
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 541 tgctatctccaactcatttgggttcggtggacacaattcagtagttgtctttgctccatt 600
Query: 1341 caggccctaa 1350
||||||||||
Sbjct: 601 caggccctaa 610
>gnl|LJGI|TC61036 similar to UniRef100_O82520 Cluster:
3-oxoacyl-[acyl-carrier-protein] synthase; n=1; Capsicum
chinense|Rep: 3-oxoacyl-[acyl-carrier-protein] synthase
- Capsicum chinense (Scotch bonnet) (Bonnet pepper),
partial (33%)
Length = 841
Score = 819 bits (413), Expect = 0.0
Identities = 502/531 (94%), Gaps = 3/531 (0%)
Strand = Plus / Plus
Query: 40 aaatgcaaaacaattaaggccacagcttctccaactgaagca---gctcctaaaagagaa 96
||||||| ||| ||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 311 aaatgcagaactattaaggccacagcttctccaactgcagcagcagctcctaaaagagaa 370
Query: 97 caagatccgaaaaagcgagtagtaataacaggaatggggcttgtttccatctttggcagt 156
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 371 caagatcccaaaaagcgagtagtaataacaggaatggggcttgtttccgtctttggcagt 430
Query: 157 gacattgatacattttacaacaagcttcttgcgggagaaagtgggataagtgtaatagat 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gacattgatacattttacaacaagcttcttgcgggagaaagtgggataagtgtaatagat 490
Query: 217 aggtttgacccctcaaaattccctgtccgttttggtggccagatacgtgatttctcttca 276
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aggtttgacccctcaaaattctctgtccgttttggtggccagatacgtgatttctcttca 550
Query: 277 gaaggttacattgatggcaagaatgaccggcgcctcgatgattgctggaggtattgctta 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gaaggttacattgatggcaagaatgaccggcgcctcgatgattgctggaggtattgctta 610
Query: 337 gttgcaggcaagagggctcttgaagatgccaaccttggacatgaagtccttaagaatatg 396
||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| ||
Sbjct: 611 gttgcaggcaagagggctcttgatgatgccaaccttggacaggaagcgcttaagaatttg 670
Query: 397 aacaaaacaagaataggagttatagttggatcaggattgggaggtgtaacagctttcaac 456
||||||||||||||||| | |||||||| ||||| |||||||| |||||||||||| |
Sbjct: 671 gacaaaacaagaataggatctctagttggaacaggaatgggaggtttaacagctttcagc 730
Query: 457 actggtgtggaagctcttctagagaagggatataagaaaattagtccatttttcattccc 516
|||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 731 actggtgtgggagctcttatagagaagggatataagaaaatgtctccatttttcattccc 790
Query: 517 tacttcatcaccaacatgggttctgctttgttggctatagatactggccta 567
|||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 791 tactccatcaccaacatgggttctgctttgttggctatagacactggccta 841
>gnl|LJGI|TC77388 similar to UniRef100_O82520 Cluster: 3-oxoacyl-[acyl-carrier-protein]
synthase; n=1; Capsicum chinense|Rep:
3-oxoacyl-[acyl-carrier-protein] synthase - Capsicum
chinense (Scotch bonnet) (Bonnet pepper), partial (18%)
Length = 665
Score = 204 bits (103), Expect = 1e-51
Identities = 242/290 (83%), Gaps = 25/290 (8%)
Strand = Plus / Plus
Query: 993 tgaagaggtgacctatatcaatgctcatgccacatcaacactagcaggtgacctggctga 1052
|||||||| |||||||||| ||||||||||||| | |||||||||| |||||||
Sbjct: 65 tgaagaggggacctatatcgatgctcatgccactt-------agcaggtgacttggctga 117
Query: 1053 ggttaatgcaatcaaacaagtttttaaggacacatcagaattgaaaatgaatgccactaa 1112
||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||
Sbjct: 118 ggttaatgcaatcaaacaagtttgtatggacacatcataattgaaaatgaatgccactaa 177
Query: 1113 gtcaatgattggtcatggtcttggggcttctggtggcttggaagctatagcaactatcaa 1172
||||||||||||| ||||| | ||||||||||| ||| ||||| |
Sbjct: 178 gtcaatgattggt----gtctt-gagcttctggtggtttgtaagct-------------a 219
Query: 1173 agcaataacaactggctggttgcacccaaccattaaccaagataacttggaggattatgt 1232
|||||||||||||| ||| |||| | ||| ||||| ||||| ||||||| |||| ||||
Sbjct: 220 ggcaataacaactgggtggatgcatcgaactattaatcaagaaaacttggcggatgatgt 279
Query: 1233 tacaattgacaccgtccctaacgtcaagaagcagcatgaagttaatgttg 1282
||| |||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 280 taccattgacacagtccctaacgtcaagaagcagcctgaagttaatgttg 329
Score = 58.0 bits (29), Expect = 1e-07
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 894 cataacatgtgatgctcatcacatgacaaacccagggcctgatggacta 942
|||||| |||||||||| |||||||||||| ||| || |||||||||||
Sbjct: 1 cataacgtgtgatgctcgtcacatgacaaatccaaggtctgatggacta 49
>gnl|LJGI|TC73418 similar to UniRef100_O82520 Cluster: 3-oxoacyl-[acyl-carrier-protein]
synthase; n=1; Capsicum chinense|Rep:
3-oxoacyl-[acyl-carrier-protein] synthase - Capsicum
chinense (Scotch bonnet) (Bonnet pepper), partial (16%)
Length = 695
Score = 190 bits (96), Expect = 2e-47
Identities = 210/249 (84%), Gaps = 18/249 (7%)
Strand = Plus / Plus
Query: 1034 tagcaggtgacctggctgaggttaatgcaatcaaacaagtttttaaggacacatcagaat 1093
||||||||||| |||||||||||||||||||||||| ||||| || |||||||||| |||
Sbjct: 95 tagcaggtgacttggctgaggttaatgcaatcaaacgagtttgtatggacacatcataat 154
Query: 1094 tgaaaatgaatgccactaagtcaatgattggtcatggtcttggggcttctggtggcttgg 1153
|||||||||||||||| ||||||||||||||| ||||| | ||||||||||| |||
Sbjct: 155 tgaaaatgaatgccacaaagtcaatgattggt----gtctt-gagcttctggtggtttgt 209
Query: 1154 aagctatagcaactatcaaagcaataacaactggctggttgcacccaaccattaaccaag 1213
||||| | |||||||||||||| ||| |||| | ||| ||||| ||||
Sbjct: 210 aagct-------------aggcaataacaactgggtggatgcatcgaactattaatcaag 256
Query: 1214 ataacttggaggattatgttacaattgacaccgtccctaacgtcaagaagcagcatgaag 1273
||||||||| |||| ||||||| |||||||| |||||||||||||||||||||| |||||
Sbjct: 257 ataacttggcggatgatgttaccattgacacagtccctaacgtcaagaagcagcctgaag 316
Query: 1274 ttaatgttg 1282
|||||||||
Sbjct: 317 ttaatgttg 325
>gnl|LJGI|TC74266 similar to UniRef100_A9S8R9 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(14%)
Length = 510
Score = 188 bits (95), Expect = 6e-47
Identities = 212/252 (84%), Gaps = 18/252 (7%)
Strand = Plus / Plus
Query: 1070 aagtttttaaggacacatcagaattgaaaatgaatgccactaagtcaatgattggtcatg 1129
|||||| || |||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 1 aagtttgtatggacacatcataattgaaaatgaatgccacaaagtcaatgattggt---- 56
Query: 1130 gtcttggggcttctggtggcttggaagctatagcaactatcaaagcaataacaactggct 1189
|||||| | |||||||||| ||| |||||| |||||||||||||| |
Sbjct: 57 gtcttgag-cttctggtggtttgtaagctag-------------gcaataacaactgggt 102
Query: 1190 ggttgcacccaaccattaaccaagataacttggaggattatgttacaattgacaccgtcc 1249
|| |||| | ||| ||||| ||||||||||||| |||| |||||||||||||||| ||||
Sbjct: 103 ggatgcatcgaactattaatcaagataacttggcggatgatgttacaattgacacagtcc 162
Query: 1250 ctaacgtcaagaagcagcatgaagttaatgttgctatctccaactcatttgggttcggtg 1309
|||||||||||||||||| |||||||||||||||| |||| || ||||||||||| ||||
Sbjct: 163 ctaacgtcaagaagcagcctgaagttaatgttgctttctcaaattcatttgggtttggtg 222
Query: 1310 gacacaattcag 1321
||||||||||||
Sbjct: 223 gacacaattcag 234
>gnl|LJGI|TC74849 similar to UniRef100_O82520 Cluster:
3-oxoacyl-[acyl-carrier-protein] synthase; n=1; Capsicum
chinense|Rep: 3-oxoacyl-[acyl-carrier-protein] synthase
- Capsicum chinense (Scotch bonnet) (Bonnet pepper),
partial (22%)
Length = 544
Score = 121 bits (61), Expect = 1e-26
Identities = 130/153 (84%)
Strand = Plus / Plus
Query: 790 gatggttttgtcttgggtgaaggctctggtgtgctggtaatggagagcttggagagtgca 849
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatggttttgttctggatgaaggctctggtgtgctggtaatggagagcttggagagtgcg 60
Query: 850 acaaaaagaggagccacaataatagcagaatatctggggggtgccataacatgtgatgct 909
|| ||||| | |||| |||| | || |||||||| ||||||||||| |||||||||
Sbjct: 61 accaaaagggaagcccaaatagttgcgagatatctggaaggtgccataacgtgtgatgct 120
Query: 910 catcacatgacaaacccagggcctgatggacta 942
| ||||||||| || || || |||||||||||
Sbjct: 121 cgtcacatgaccaatcccaggtctgatggacta 153
Score = 107 bits (54), Expect = 2e-22
Identities = 203/251 (80%), Gaps = 20/251 (7%)
Strand = Plus / Plus
Query: 1034 tagcaggtgacctggctgaggttaatgcaatcaaacaagtttttaaggacacatcag-aa 1092
|||| |||||| |||||||||||||||||||| |||| |||| || |||||||||| ||
Sbjct: 227 tagccggtgacttggctgaggttaatgcaatccaacacgtttgtatggacacatcactaa 286
Query: 1093 ttgaaaatgaatgccacta-agtcaatgattggtcatggtcttggggcttctggtggctt 1151
||||||||||||||||| | |||| ||||||||| |||||| | |||||||||| ||
Sbjct: 287 ttgaaaatgaatgccaccacagtccatgattggt----gtcttgag-cttctggtggttt 341
Query: 1152 ggaagctatagcaactatcaaagcaataacaactggctggttgcacccaaccattaacca 1211
| |||||| || ||||| ||||| ||| |||| | ||| ||||| |
Sbjct: 342 gtaagctag-------------gccataaccactgggtggatgcatcgaactattaatct 388
Query: 1212 agataacttggaggattatgttacaattgacaccgtccctaacgtcaagaagcagcatga 1271
||||||||||| |||| ||||||| |||||||| |||||| ||||||||||||||| |||
Sbjct: 389 agataacttggcggatgatgttaccattgacacagtccctgacgtcaagaagcagcctga 448
Query: 1272 agttaatgttg 1282
|||||||||||
Sbjct: 449 agttaatgttg 459
>gnl|LJGI|AV780186 similar to UniRef100_O82520 Cluster: 3-oxoacyl-[acyl-carrier-protein]
synthase; n=1; Capsicum chinense|Rep:
3-oxoacyl-[acyl-carrier-protein] synthase - Capsicum
chinense (Scotch bonnet) (Bonnet pepper), partial (10%)
Length = 472
Score = 119 bits (60), Expect = 5e-26
Identities = 84/92 (91%)
Strand = Plus / Minus
Query: 1034 tagcaggtgacctggctgaggttaatgcaatcaaacaagtttttaaggacacatcagaat 1093
||||||||||| ||||||||||||||||||||| || ||||| || |||||||||| |||
Sbjct: 398 tagcaggtgacttggctgaggttaatgcaatcacaccagtttgtatggacacatcataat 339
Query: 1094 tgaaaatgaatgccactaagtcaatgattggt 1125
|||||||||||||||| || ||||||||||||
Sbjct: 338 tgaaaatgaatgccaccaactcaatgattggt 307
Score = 99.6 bits (50), Expect = 4e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 1217 acttggaggattatgttacaattgacaccgtccctaacgtcaagaagcagcatgaagtta 1276
|||||| |||| |||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 138 acttggcggatgatgttacaattgacacagtccctaacgtcaagaagcagcctgaagtta 79
Query: 1277 atgttg 1282
||||||
Sbjct: 78 atgttg 73
>gnl|LJGI|TC76634 similar to UniRef100_O24078 Cluster: Protein phosphatase 2C; n=1;
Medicago sativa|Rep: Protein phosphatase 2C - Medicago
sativa (Alfalfa), partial (9%)
Length = 591
Score = 83.8 bits (42), Expect = 3e-15
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 1213 gataacttggaggattatgttacaattgacaccgtccctaacgtcaagaagcagcatgaa 1272
||||||||| |||| ||||||| |||||||| ||| |||||||||||||||||| ||||
Sbjct: 1 gataacttgacggatgatgttaccattgacacagtctctaacgtcaagaagcagcctgaa 60
Query: 1273 gttaatgttg 1282
||||||||||
Sbjct: 61 gttaatgttg 70
>gnl|LJGI|BW597832 similar to UniRef100_Q9M507 Cluster: Beta-ketoacyl-ACP synthetase
I-2; n=1; Glycine max|Rep: Beta-ketoacyl-ACP synthetase
I-2 - Glycine max (Soybean), partial (28%)
Length = 469
Score = 60.0 bits (30), Expect = 4e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 1264 cagcatgaagttaatgttgctatctccaactcatttgggttcggtggacacaattcagtt 1323
|||||||||||||||||||| || || || |||||||| || ||||||||||| || |||
Sbjct: 403 cagcatgaagttaatgttgccatttcaaattcatttggatttggtggacacaactctgtt 462
Query: 1324 gt 1325
||
Sbjct: 463 gt 464
>gnl|LJGI|TC64517 homologue to UniRef100_Q9M508 Cluster: Beta-ketoacyl-ACP synthetase
I; n=1; Glycine max|Rep: Beta-ketoacyl-ACP synthetase I -
Glycine max (Soybean), partial (94%)
Length = 2010
Score = 60.0 bits (30), Expect = 4e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 1264 cagcatgaagttaatgttgctatctccaactcatttgggttcggtggacacaattcagtt 1323
|||||||||||||||||||| || || || |||||||| || ||||||||||| || |||
Sbjct: 1397 cagcatgaagttaatgttgccatttcaaattcatttggatttggtggacacaactctgtt 1456
Query: 1324 gt 1325
||
Sbjct: 1457 gt 1458