Miyakogusa Predicted Gene
- Lj4g3v3004120.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3004120.3 Non Chatacterized Hit- tr|I1KPK3|I1KPK3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.12812
PE,82.58,0,coiled-coil,NULL; seg,NULL; PPR,Pentatricopeptide
repeat,CUFF.52030.3
(1719 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO011355 similar to UniRef100_A7QU94 Cluster: Chromosom... 1409 0.0
gnl|LJGI|FS329128 similar to UniRef100_A7QU94 Cluster: Chromosom... 1187 0.0
gnl|LJGI|FS337460 similar to UniRef100_A7QU94 Cluster: Chromosom... 521 e-147
>gnl|LJGI|GO011355 similar to UniRef100_A7QU94 Cluster: Chromosome chr2 scaffold_176,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_176, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 734
Score = 1409 bits (711), Expect = 0.0
Identities = 731/735 (99%), Gaps = 2/735 (0%)
Strand = Plus / Plus
Query: 921 ggcagctccatcaaatgtatacagaaaggtgggtccctttaaatttagtccaagggcccc 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggcagctccatcaaatgtatacagaaaggtgggtccctttaaatttagtccaagggcccc 61
Query: 981 ggatttttatcctggtgaggctatgtgcataacaaaccacaaagatgggcgggaatcact 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggatttttatcctggtgaggctatgtgcataacaaaccacaaagatgggcgggaatcact 121
Query: 1041 tctgttaagagccccgagaaaagaagaaaattcatcattacttaaaccctccctcctctt 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tctgttaagagccccgagaaaagaagaaaattcatcattacttaaaccctccctcctctt 181
Query: 1101 tccacttcttgctgtgtttgccactggtgatgctgcctctggacttattgaccccagcct 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tccacttcttgctgtgtttgccactggtgatgctgcctctggacttattgaccccagcct 241
Query: 1161 acctcagttgctatcaattgttgcagtttcatctcttgctgttggatctactttgaactc 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acctcagttgctatcaattgttgcagtttcatctcttgctgttggatctactttgaactc 301
Query: 1221 ctttgttcttccccagttaaatcagcttccgcaaaggtcggtagaaacaactgctgtcaa 1280
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 302 ctttgctcttccccagttaaatcagcttctgcaaaggtcggtagaaacaactgctgtcaa 361
Query: 1281 acaacaacttttatctcaatatgatgtgcttcagtctcgcatcaatggcctaaaagaagc 1340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 acaacaacttttatctcaatatgatgtgcttcagtctcgcatcaatggcctaaaagaagc 421
Query: 1341 tgctgaaaaagagatttggatgttggctcgaatgtgccagcttgagaataaaatttcagc 1400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgctgaaaaagagatttggatgttggctcgaatgtgccagcttgagaataaaatttcagc 481
Query: 1401 tgttggagaaccttcttataggacacggataagtaaagtcaagagagtccgagagagcct 1460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tgttggagaaccttcttataggacacggataagtaaagtcaagagagtccgagagagcct 541
Query: 1461 gcagaactccctccagggaagaattgaattgattgctagctatgctaggatttcctcaat 1520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gcagaactccctccagggaagaattgaattgattgctagctatgctaggatttcctcaat 601
Query: 1521 gattgaaattgaagtggagatggaaaccgatgttcttgctgctgaaactgccagcgatgt 1580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gattgaaattgaagtggagatggaaaccgatgttcttgctgctgaaactgccagcgatgt 661
Query: 1581 ggatagtattacagaacaaatagagcaaatcatggagctcgaaaatttggaggagagatg 1640
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 662 ggatagtattacagaacaaatagagcaaatcatggagctcg-aaatttgga-gagagatg 719
Query: 1641 gaaaatgcaagcaga 1655
|||||||||||||||
Sbjct: 720 gaaaatgcaagcaga 734
>gnl|LJGI|FS329128 similar to UniRef100_A7QU94 Cluster: Chromosome chr2 scaffold_176,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_176, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 645
Score = 1187 bits (599), Expect = 0.0
Identities = 602/603 (99%)
Strand = Plus / Plus
Query: 1 atgactctcaacttgtccactccttccttctctcgtttacttcctcatcatcacccttct 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 43 atgactctcaacttgtccactccttccttctcacgtttacttcctcatcatcacccttct 102
Query: 61 tcttctgttctccccaaattctctcacaacgctttccccactctctccttccccgctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tcttctgttctccccaaattctctcacaacgctttccccactctctccttccccgctttc 162
Query: 121 tctcttcccaactcgccgagatttctcaacgccaaagcctccgtcagcgagagccggaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tctcttcccaactcgccgagatttctcaacgccaaagcctccgtcagcgagagccggaat 222
Query: 181 gaaacctccgatgaccacaccgtttccgcctccgaccagcaactcctgctacgaatttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gaaacctccgatgaccacaccgtttccgcctccgaccagcaactcctgctacgaatttct 282
Query: 241 gccaccgctaaagacgccgacgaggccttgcagatgatcgctgacaacgctgaaacaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gccaccgctaaagacgccgacgaggccttgcagatgatcgctgacaacgctgaaacaaac 342
Query: 301 tcaggaggtggtgtcgtttccacctctgattgttgctccattatatccgccgctcttagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tcaggaggtggtgtcgtttccacctctgattgttgctccattatatccgccgctcttagc 402
Query: 361 cggaataatccccagcttgccttgtctgttttctacgccatgcgcgccagttttcgtcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cggaataatccccagcttgccttgtctgttttctacgccatgcgcgccagttttcgtcaa 462
Query: 421 gttgacgagaatggtcctttagttgagagatggaagtggccgaggcctaatgcgaatgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gttgacgagaatggtcctttagttgagagatggaagtggccgaggcctaatgcgaatgtt 522
Query: 481 tacacggtgttgattaacggtttggcggcatccttgagggtttcggatgctctaagcgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tacacggtgttgattaacggtttggcggcatccttgagggtttcggatgctctaagcgtg 582
Query: 541 atcaaatacatatgtgaggtgggcgtgtctcctggtgaggaggtcccttttgggaagata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 atcaaatacatatgtgaggtgggcgtgtctcctggtgaggaggtcccttttgggaagata 642
Query: 601 gtg 603
|||
Sbjct: 643 gtg 645
>gnl|LJGI|FS337460 similar to UniRef100_A7QU94 Cluster: Chromosome chr2 scaffold_176,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_176, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 829
Score = 521 bits (263), Expect = e-147
Identities = 583/693 (84%), Gaps = 45/693 (6%)
Strand = Plus / Plus
Query: 1 atgactctcaacttgtccactccttccttctc---tcgtttacttcctcatcatcacc-- 55
||||||||||||||||||||||||| |||||| |||||||||||| |||| ||||
Sbjct: 71 atgactctcaacttgtccactcctttcttctcctctcgtttacttccgcatcctcactat 130
Query: 56 -cttcttcttctgttctccccaaattctctc---------------acaacgct---ttc 96
||||||||||||||||| |||||||||||| |||||||| |||
Sbjct: 131 tcttcttcttctgttctcaccaaattctctccaacctgccccaacaacaacgctcctttc 190
Query: 97 cccactctctccttccccgctttctctcttcccaactcgccgagatttctcaacgccaaa 156
|||||||||||||||| ||||||| | |||||| | |||||||| |||||| | |||
Sbjct: 191 cccactctctccttcctcgctttcacacttcccttcccgccgagacccctcaacacaaaa 250
Query: 157 gcctccgtcagcgagagccggaatgaaacctccgatgaccacaccgtttccgcctccgac 216
|||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||
Sbjct: 251 tcctccgtcagcgagagccggaatgaaacctcctcagacgacaccgtttccggctccgac 310
Query: 217 ca---------gcaactcctgctacgaatttctgccaccgctaaagacgccgacgaggcc 267
|| |||||| |||| ||||||| ||| |||||||||||||||||||||||||
Sbjct: 311 caattcgaccggcaacttctgcaacgaattgctgtcaccgctaaagacgccgacgaggcc 370
Query: 268 ttgcagatgatcgctgacaacgctgaaacaaactcaggaggtggtgtcgtttccacctct 327
|||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||||||
Sbjct: 371 ttgcagatgatcgccgacaacgctgctgcaacctcagaaggtggtgtcgtttccacctct 430
Query: 328 gattgttgctccattatatccgccgctcttagccggaataatccccagcttgccttgtct 387
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 431 gattgttgctccattatatccgccgctcttagccggaataatccccagcttgctttgtcc 490
Query: 388 gttttctacgccatgcgcgccagttttcgtcaagttgacgagaatggtcctttagttgag 447
||||||||||||||| | |||||||| |||||||| ||||||||| || ||||||||
Sbjct: 491 gttttctacgccatgtggatcagttttcatcaagttggcgagaatggctctatagttgag 550
Query: 448 agatggaagtggccgaggcctaatgcgaatgtttacacggtgttgattaacggtttggcg 507
|| ||||||||||||||||| |||||| |||||||||| |||||| || | ||||||||
Sbjct: 551 aggtggaagtggccgaggcccaatgcgcatgtttacacagtgttggttcagggtttggct 610
Query: 508 gcatccttgagggtttcggatgctctaagcgtgatcaaatacatatgtgaggtgggcgtg 567
| |||||||| ||| |||||||||| | ||||| || || || |||||||||||||||
Sbjct: 611 gtgtccttgagagttccggatgctcttacggtgattaagtatatctgtgaggtgggcgtg 670
Query: 568 tctcctggtgaggaggtcccttttgggaagatagtgagatgtcctagttgtaggatagct 627
|||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 671 tctcctggtgaggaggtcccttttgg---gatag---------ctagttgtaggatagct 718
Query: 628 gttgctgttgcacagccacagcaaggtattcag 660
||||||||||| ||| ||||||| |||||||||
Sbjct: 719 gttgctgttgcccagtcacagcagggtattcag 751