Miyakogusa Predicted Gene

Lj4g3v3001250.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v3001250.1 CUFF.51972.1
         (358 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW612626                                                     157   6e-38
gnl|LJGI|TC81240 similar to UniRef100_A0E7I7 Cluster: Chromosome...   157   6e-38
gnl|LJGI|TC64709                                                      149   1e-35
gnl|LJGI|TC57119                                                      127   5e-29

>gnl|LJGI|BW612626 
          Length = 476

 Score =  157 bits (79), Expect = 6e-38
 Identities = 79/79 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgttgaatattgttgagataatgaaaccccttctatccctttgttctctcttctctgtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 atgttgaatattgttgagataatgaaaccccttctatccctttgttctctcttctctgtc 179

                              
Query: 61  cctattccctctcttctcc 79
           |||||||||||||||||||
Sbjct: 178 cctattccctctcttctcc 160


>gnl|LJGI|TC81240 similar to UniRef100_A0E7I7 Cluster: Chromosome undetermined
           scaffold_81, whole genome shotgun sequence; n=1;
           Paramecium tetraurelia|Rep: Chromosome undetermined
           scaffold_81, whole genome shotgun sequence - Paramecium
           tetraurelia, partial (4%)
          Length = 670

 Score =  157 bits (79), Expect = 6e-38
 Identities = 79/79 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgttgaatattgttgagataatgaaaccccttctatccctttgttctctcttctctgtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atgttgaatattgttgagataatgaaaccccttctatccctttgttctctcttctctgtc 292

                              
Query: 61  cctattccctctcttctcc 79
           |||||||||||||||||||
Sbjct: 291 cctattccctctcttctcc 273


>gnl|LJGI|TC64709 
          Length = 873

 Score =  149 bits (75), Expect = 1e-35
 Identities = 78/79 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttgaatattgttgagataatgaaaccccttctatccctttgttctctcttctctgtc 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 74  atgttgaatattgttgagataatgaaaccccttctatccctttgttctctcttctctgcc 133

                              
Query: 61  cctattccctctcttctcc 79
           |||||||||||||||||||
Sbjct: 134 cctattccctctcttctcc 152


>gnl|LJGI|TC57119 
          Length = 4527

 Score =  127 bits (64), Expect = 5e-29
 Identities = 64/64 (100%)
 Strand = Plus / Minus

                                                                       
Query: 72  tcttctccactgttacaggtgctactcccttcctttcactccaattgctgtaggttttgg 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 tcttctccactgttacaggtgctactcccttcctttcactccaattgctgtaggttttgg 725

               
Query: 132 tcac 135
           ||||
Sbjct: 724 tcac 721