Miyakogusa Predicted Gene
- Lj4g3v2989010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2989010.1 Non Chatacterized Hit- tr|I3SW87|I3SW87_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,Glyco_hydro_28,Glycoside hydrolase, family 28; no
description,Pectin lyase fold; seg,NULL; SUBFAMILY,CUFF.51959.1
(723 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65908 similar to UniRef100_A7QNJ7 Cluster: Chromosome... 1298 0.0
gnl|LJGI|TC63331 similar to UniRef100_A7QNJ7 Cluster: Chromosome... 470 e-132
gnl|LJGI|BP081743 similar to UniRef100_Q84LI7 Cluster: Polygalac... 434 e-121
gnl|LJGI|GO012331 similar to UniRef100_A7QNJ7 Cluster: Chromosom... 430 e-120
gnl|LJGI|TC57648 similar to UniRef100_Q84LI7 Cluster: Polygalact... 80 2e-14
gnl|LJGI|DC596068 similar to UniRef100_Q84LI7 Cluster: Polygalac... 68 8e-11
gnl|LJGI|FS345102 similar to UniRef100_A7Q8H9 Cluster: Chromosom... 60 2e-08
>gnl|LJGI|TC65908 similar to UniRef100_A7QNJ7 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 824
Score = 1298 bits (655), Expect = 0.0
Identities = 676/679 (99%), Gaps = 3/679 (0%)
Strand = Plus / Plus
Query: 1 atggatgttctattactattagtatttatgatggttgttctgccaagcctgcatgtggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 atggatgttctattactattagtatttatgatggttgttctgccaagcctgcatgtggtg 205
Query: 61 gagagtgtaagaactccagttctggaaaatttcgagtactgtgctgtgaactgcagagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gagagtgtaagaactccagttctggaaaatttcgagtactgtgctgtgaactgcagagct 265
Query: 121 tacagtgcctcagtgacagattttggaggggttggtgatggaacaactttgaacacacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tacagtgcctcagtgacagattttggaggggttggtgatggaacaactttgaacacacaa 325
Query: 181 gcctttcggaaagccatagaacatttgagccagtactcatctaatggagggtctcagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gcctttcggaaagccatagaacatttgagccagtactcatctaatggagggtctcagctt 385
Query: 241 tatgttcctccaggaagatggttgactggaagcttcaatctcaccagccacttcacttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tatgttcctccaggaagatggttgactggaagcttcaatctcaccagccacttcacttta 445
Query: 301 ttcattcacaaggatgctgtgattcttggctctcaggatgaaaatgagtggccagtgatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttcattcacaaggatgctgtgattcttggctctcaggatgaaaatgagtggccagtgatt 505
Query: 361 gatcctcttccatcttatggtagagggagggatacccaaggtggaaggtttagcagtctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gatcctcttccatcttatggtagagggagggatacccaaggtggaaggtttagcagtctt 565
Query: 421 atttttggaacccacctcacagatgtgatcataactggggacaatggcacattagatgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 atttttggaacccacctcacagatgtgatcataactggggacaatggcacattagatgga 625
Query: 481 caaggtgatctgtggtggaaaaaattccacaataagcagctacaatatacccggccttac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 caaggtgatctgtggtggaaaaaattccacaataagcagctacaatatacccggccttac 685
Query: 541 ctgattgaaattatgtattcagataatgttcagatatccaatctcactttggttaattct 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 686 ctgattgaaattatgtattcagataatgttcagatatccaatctcactttggtt-attct 744
Query: 601 ccatcatggaatatccatcctgtttattgcagcaacgttattgttcaaggcatcacaatt 660
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 745 ccatcatggaatatccatcctg-ttattgcagcaacgttattgttcaa-gcatcacaatt 802
Query: 661 cttgctcctgtgacatccc 679
|||||||||||||||||||
Sbjct: 803 cttgctcctgtgacatccc 821
>gnl|LJGI|TC63331 similar to UniRef100_A7QNJ7 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 1080
Score = 470 bits (237), Expect = e-132
Identities = 240/241 (99%)
Strand = Plus / Plus
Query: 483 aggtgatctgtggtggaaaaaattccacaataagcagctacaatatacccggccttacct 542
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 aggtgctctgtggtggaaaaaattccacaataagcagctacaatatacccggccttacct 73
Query: 543 gattgaaattatgtattcagataatgttcagatatccaatctcactttggttaattctcc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gattgaaattatgtattcagataatgttcagatatccaatctcactttggttaattctcc 133
Query: 603 atcatggaatatccatcctgtttattgcagcaacgttattgttcaaggcatcacaattct 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atcatggaatatccatcctgtttattgcagcaacgttattgttcaaggcatcacaattct 193
Query: 663 tgctcctgtgacatccccaaatacagacggcatcaaccctgactcttgcacaaacacacg 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tgctcctgtgacatccccaaatacagacggcatcaaccctgactcttgcacaaacacacg 253
Query: 723 g 723
|
Sbjct: 254 g 254
>gnl|LJGI|BP081743 similar to UniRef100_Q84LI7 Cluster: Polygalacturonase-like
protein; n=1; Fragaria x ananassa|Rep:
Polygalacturonase-like protein - Fragaria ananassa
(Strawberry), partial (17%)
Length = 487
Score = 434 bits (219), Expect = e-121
Identities = 222/223 (99%)
Strand = Plus / Plus
Query: 410 ttagcagtcttatttttggaacccacctcacagatgtgatcataactggggacaatggca 469
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ttagcagtcttatttgtggaacccacctcacagatgtgatcataactggggacaatggca 72
Query: 470 cattagatggacaaggtgatctgtggtggaaaaaattccacaataagcagctacaatata 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cattagatggacaaggtgatctgtggtggaaaaaattccacaataagcagctacaatata 132
Query: 530 cccggccttacctgattgaaattatgtattcagataatgttcagatatccaatctcactt 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 cccggccttacctgattgaaattatgtattcagataatgttcagatatccaatctcactt 192
Query: 590 tggttaattctccatcatggaatatccatcctgtttattgcag 632
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tggttaattctccatcatggaatatccatcctgtttattgcag 235
>gnl|LJGI|GO012331 similar to UniRef100_A7QNJ7 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 687
Score = 430 bits (217), Expect = e-120
Identities = 217/217 (100%)
Strand = Plus / Plus
Query: 507 ccacaataagcagctacaatatacccggccttacctgattgaaattatgtattcagataa 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ccacaataagcagctacaatatacccggccttacctgattgaaattatgtattcagataa 316
Query: 567 tgttcagatatccaatctcactttggttaattctccatcatggaatatccatcctgttta 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tgttcagatatccaatctcactttggttaattctccatcatggaatatccatcctgttta 376
Query: 627 ttgcagcaacgttattgttcaaggcatcacaattcttgctcctgtgacatccccaaatac 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttgcagcaacgttattgttcaaggcatcacaattcttgctcctgtgacatccccaaatac 436
Query: 687 agacggcatcaaccctgactcttgcacaaacacacgg 723
|||||||||||||||||||||||||||||||||||||
Sbjct: 437 agacggcatcaaccctgactcttgcacaaacacacgg 473
Score = 381 bits (192), Expect = e-105
Identities = 195/196 (99%)
Strand = Plus / Plus
Query: 1 atggatgttctattactattagtatttatgatggttgttctgccaagcctgcatgtggtg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 64 atggatgttctattactattagtatttatggtggttgttctgccaagcctgcatgtggtg 123
Query: 61 gagagtgtaagaactccagttctggaaaatttcgagtactgtgctgtgaactgcagagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gagagtgtaagaactccagttctggaaaatttcgagtactgtgctgtgaactgcagagct 183
Query: 121 tacagtgcctcagtgacagattttggaggggttggtgatggaacaactttgaacacacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tacagtgcctcagtgacagattttggaggggttggtgatggaacaactttgaacacacaa 243
Query: 181 gcctttcggaaagcca 196
||||||||||||||||
Sbjct: 244 gcctttcggaaagcca 259
>gnl|LJGI|TC57648 similar to UniRef100_Q84LI7 Cluster: Polygalacturonase-like
protein; n=1; Fragaria x ananassa|Rep:
Polygalacturonase-like protein - Fragaria ananassa
(Strawberry), partial (86%)
Length = 1557
Score = 79.8 bits (40), Expect = 2e-14
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 601 ccatcatggaatatccatcctgtttattgcagcaacgttattgttcaaggcatcacaatt 660
|||||||||||| |||||||||||||| ||||||| |||| || ||||||| || |||
Sbjct: 675 ccatcatggaatgtccatcctgtttatagcagcaatattataattaaaggcataaccatt 734
Query: 661 cttgctcctgtgacatccccaaatacagacggcatcaaccctgactcttgcacaaa 716
| |||||||| |||||||| || || || ||||||||||| || ||||| |||||
Sbjct: 735 atcgctcctgtcacatcccctaacactgatggcatcaacccagattcttgtacaaa 790
>gnl|LJGI|DC596068 similar to UniRef100_Q84LI7 Cluster: Polygalacturonase-like
protein; n=1; Fragaria x ananassa|Rep:
Polygalacturonase-like protein - Fragaria ananassa
(Strawberry), partial (38%)
Length = 550
Score = 67.9 bits (34), Expect = 8e-11
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 607 tggaatatccatcctgtttattgcagcaacgttattgttcaaggcatcacaattcttgct 666
|||||| | ||||||||||| ||||| | ||||||| |||||||||| || |||||
Sbjct: 121 tggaatgttcatcctgtttacagcagcgatattattgtgaaaggcatcaccataattgct 180
Query: 667 cctgtgacatccccaaatacagacggcatcaaccctgactcttgcacaaa 716
|||||||| || ||||| ||||| ||||||||||| || || ||||||||
Sbjct: 181 cctgtgacgtctccaaacacagatggcatcaacccagattcctgcacaaa 230
>gnl|LJGI|FS345102 similar to UniRef100_A7Q8H9 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 636
Score = 60.0 bits (30), Expect = 2e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 233 ctcagctttatgttcctccaggaagatggttgactggaagcttcaatctcaccagcca 290
||||||| |||||||| ||||||| |||||||||| ||| ||||||||||| |||||
Sbjct: 354 ctcagctctatgttcccccaggaaaatggttgactcaaagtttcaatctcacaagcca 411