Miyakogusa Predicted Gene
- Lj4g3v2976880.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2976880.1 tr|B9GKE5|B9GKE5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_839681 PE=3
SV=1,69.18,0,Homeodomain-like,Homeodomain-like; domain associated with
HOX domains,POX; seg,NULL; no description,,CUFF.52115.1
(1044 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS336468 similar to UniRef100_Q8LLE1 Cluster: BEL1-rela... 759 0.0
gnl|LJGI|TC62593 homologue to UniRef100_Q7Y0Z9 Cluster: Bell-lik... 287 7e-77
gnl|LJGI|TC65502 similar to UniRef100_Q8LLE1 Cluster: BEL1-relat... 88 1e-16
gnl|LJGI|TC68249 similar to UniRef100_A7PV26 Cluster: Chromosome... 62 7e-09
>gnl|LJGI|FS336468 similar to UniRef100_Q8LLE1 Cluster: BEL1-related homeotic protein
14; n=1; Solanum tuberosum|Rep: BEL1-related homeotic
protein 14 - Solanum tuberosum (Potato), partial (10%)
Length = 769
Score = 759 bits (383), Expect = 0.0
Identities = 383/383 (100%)
Strand = Plus / Plus
Query: 43 ggcatggatatgataggcttttcaaagaaccttcatcttcatcaccaacaacaacaacaa 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggcatggatatgataggcttttcaaagaaccttcatcttcatcaccaacaacaacaacaa 446
Query: 103 gaagagaatcatctaatccaagattcttcttccccttggcagaacaacagcaggttccta 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gaagagaatcatctaatccaagattcttcttccccttggcagaacaacagcaggttccta 506
Query: 163 gttgatgattcttctttaaggtgtgtgttcccttgtgaaggtaacgaaagaccaagtcaa 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gttgatgattcttctttaaggtgtgtgttcccttgtgaaggtaacgaaagaccaagtcaa 566
Query: 223 ggcctttcactttctctcagctcaaccaacccttctagtattggtttgcaaccttttgag 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ggcctttcactttctctcagctcaaccaacccttctagtattggtttgcaaccttttgag 626
Query: 283 ctaagacacacaaaccaacaccatcatcatcatcaacaacaaatgttgcaagatgcaaat 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ctaagacacacaaaccaacaccatcatcatcatcaacaacaaatgttgcaagatgcaaat 686
Query: 343 atttatcaccaacatggggattttgtgctaaaacactccaagttcttggtacctgcacag 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 atttatcaccaacatggggattttgtgctaaaacactccaagttcttggtacctgcacag 746
Query: 403 gatctattaaacgagctttgtag 425
|||||||||||||||||||||||
Sbjct: 747 gatctattaaacgagctttgtag 769
Score = 87.7 bits (44), Expect = 1e-16
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 1 atgggtgaaaacaaatccagggacatggtttcatcatcaaccgg 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 atgggtgaaaacaaatccagggacatggtttcatcatcaaccgg 316
>gnl|LJGI|TC62593 homologue to UniRef100_Q7Y0Z9 Cluster: Bell-like homeodomain protein
3; n=1; Solanum lycopersicum|Rep: Bell-like homeodomain
protein 3 - Solanum lycopersicum (Tomato) (Lycopersicon
esculentum), partial (30%)
Length = 1304
Score = 287 bits (145), Expect = 7e-77
Identities = 250/285 (87%)
Strand = Plus / Plus
Query: 760 ttgggagagaaagatccaatttcaccaggcacaacaaagggcgaaacacctaggcttaga 819
||||||||||||||||| || |||| || ||||||| || ||||| || ||||| | |
Sbjct: 38 ttgggagagaaagatcctgttgcaccgggtacaacaagaggtgaaacgccaaggctcaaa 97
Query: 820 atcattgaacaaacactgagacagcagagggcattccagcaaatgaacatgatggaaact 879
||||||| ||| ||||||||||||| ||||| || ||||||||||||||||||||||||
Sbjct: 98 gtcattgaccaagcactgagacagcaaagggcgtttcagcaaatgaacatgatggaaact 157
Query: 880 catccatggaggccacaacgtggccttcctgagcgatccgtttcggttctccgggcttgg 939
||||||||||| |||||||| |||||||| || || |||||||| ||||| || ||||||
Sbjct: 158 catccatggagaccacaacggggccttccagaacgttccgtttcagttcttcgcgcttgg 217
Query: 940 ctctttgagcactttctccacccgtacccaagcgatgtagataaacatattttagccagg 999
||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| |
Sbjct: 218 ctctttgagcattttcttcacccgtacccaagcgatgttgataaacatattttagcccgc 277
Query: 1000 caaactggtctctcgagaagccaggtatcgaattggtttatcaat 1044
|||||||||||||| ||||| ||||| || |||||||||||||||
Sbjct: 278 caaactggtctctccagaagtcaggtttcaaattggtttatcaat 322
>gnl|LJGI|TC65502 similar to UniRef100_Q8LLE1 Cluster: BEL1-related homeotic protein
14; n=1; Solanum tuberosum|Rep: BEL1-related homeotic
protein 14 - Solanum tuberosum (Potato), partial (10%)
Length = 1221
Score = 87.7 bits (44), Expect = 1e-16
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 217 agtcaaggcctttcactttctctcagctcaaccaacccttctagtattggtttgcaacct 276
|||||||| |||||||| ||||||| ||||||||||||||| || || ||||||||| ||
Sbjct: 809 agtcaaggactttcactctctctcaactcaaccaacccttccagaatcggtttgcaatct 868
Query: 277 tttgagctaagacacacaaaccaa 300
|||||||| ||||| |||| ||||
Sbjct: 869 tttgagctgagacagacaagccaa 892
>gnl|LJGI|TC68249 similar to UniRef100_A7PV26 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 1600
Score = 61.9 bits (31), Expect = 7e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 937 tggctctttgagcactttctccacccgtacccaagcgatgtagataa 983
||||| |||||||| ||||| ||||||||||||||||||| ||||||
Sbjct: 528 tggctttttgagcattttcttcacccgtacccaagcgatgcagataa 574