Miyakogusa Predicted Gene
- Lj4g3v2951230.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2951230.1 tr|O04696|O04696_PEA AT-hook motif nuclear
localized protein 1 OS=Pisum sativum GN=PsAHL1 PE=2
SV=1,73.82,0,seg,NULL; DNA binding domain with preference for A/T r,AT
hook, DNA-binding motif; AF0104/ALDC/Ptd01,CUFF.51910.1
(1077 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66877 similar to UniRef100_O04695 Cluster: DNA-bindin... 242 4e-63
>gnl|LJGI|TC66877 similar to UniRef100_O04695 Cluster: DNA-binding PD1-like protein;
n=1; Pisum sativum|Rep: DNA-binding PD1-like protein -
Pisum sativum (Garden pea), partial (59%)
Length = 1432
Score = 242 bits (122), Expect = 4e-63
Identities = 358/434 (82%), Gaps = 2/434 (0%)
Strand = Plus / Plus
Query: 434 gaggccgcccacctggatctggaaggaagcaacagctagcccttttaggtgattggatga 493
|||| |||||||| ||| ||||||||||||||||||||| |||||||| |||||||
Sbjct: 585 gagggcgcccaccgggaagtggaaggaagcaacagctagctgcattaggtgaatggatga 644
Query: 494 atagttcagcaggggtggctttttctccacatgttatcaccattgctgttggggaggaca 553
| ||||| ||||| | |||||||| || ||||||||||||||||| | |||||||||||
Sbjct: 645 acagttctgcaggactagctttttcacctcatgttatcaccattgcagctggggaggaca 704
Query: 554 ttgtagcgaagttattgtcattatcacagcagagaccaagggcactttgcatcttatcgg 613
|||| || ||| | |||||||| ||||| |||||||||||||| | ||||| || || |
Sbjct: 705 ttgttgcaaagctgttgtcattttcacaacagagaccaagggctttatgcattttgtcag 764
Query: 614 gcactggaacagtttcttcagttactctccgacagcctgcttccaccaataccagtgtaa 673
| |||| |||||||||| ||| || || || ||||| ||||| || | | | |||| |
Sbjct: 765 gatctgggacagtttctttagtcaccctgcgccagccagcttcgactagtgtcggtgtta 824
Query: 674 cttttgaggggcgattccaaatattatgcttgtctggttcttacttggtgtctgaagatg 733
| | |||||| ||||| ||||| | ||||||||||||||||| ||||| |||||||||
Sbjct: 825 cgtatgagggccgatttgaaatactgtgcttgtctggttcttatttggttgctgaagatg 884
Query: 734 gaggaccctca-aatagaacaggtggcataagtgtttctctttctagccctgaaggtcat 792
| ||| ||||| ||||||||||||||||| |||||||| ||||| || |||||||| |||
Sbjct: 885 gtgga-cctcacaatagaacaggtggcatgagtgtttccctttcaagtcctgaaggccat 943
Query: 793 gttattggtggtggtgctgctacgcttattgctggaagtccagtgcaggtggtattgggc 852
||||||||||||| || |||| ||||||||||| ||| | |||||||||||| | ||
Sbjct: 944 gttattggtggtgctgtcgctaggcttattgctgcaagctctgtgcaggtggtagtttgc 1003
Query: 853 agttttgtgtatgg 866
|||||||| |||||
Sbjct: 1004 agttttgtatatgg 1017
Score = 75.8 bits (38), Expect = 5e-13
Identities = 61/68 (89%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 1 atggatgggagagaagctatggcattttctggtggctctg---catatttcatgcataga 57
|||||||||||||||||||||||||| ||||||||||||| | |||| ||| ||||||
Sbjct: 131 atggatgggagagaagctatggcattctctggtggctctgctccgtattacattcataga 190
Query: 58 ggaggggt 65
||||||||
Sbjct: 191 ggaggggt 198