Miyakogusa Predicted Gene
- Lj4g3v2949790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2949790.1 Non Chatacterized Hit- tr|I1KS03|I1KS03_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.48,0,U-box,U box
domain; KAP,NULL; no description,Zinc finger, RING/FYVE/PHD-type; no
description,Armadil,CUFF.51878.1
(1671 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66836 weakly similar to UniRef100_O48700 Cluster: F3I... 1639 0.0
gnl|LJGI|BW630690 similar to UniRef100_A7QBN6 Cluster: Chromosom... 910 0.0
gnl|LJGI|TC82322 weakly similar to UniRef100_O48700 Cluster: F3I... 315 5e-85
gnl|LJGI|TC63760 299 3e-80
gnl|LJGI|TC80485 210 2e-53
gnl|LJGI|BP080337 151 2e-35
gnl|LJGI|AU252019 weakly similar to UniRef100_A7QBN6 Cluster: Ch... 133 4e-30
>gnl|LJGI|TC66836 weakly similar to UniRef100_O48700 Cluster: F3I6.27 protein; n=1;
Arabidopsis thaliana|Rep: F3I6.27 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (32%)
Length = 1146
Score = 1639 bits (827), Expect = 0.0
Identities = 846/851 (99%), Gaps = 1/851 (0%)
Strand = Plus / Plus
Query: 822 cttgatggctcaggaaattggagcaatggctctcttcaaccttgctgtgaataacaacgg 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgatggctcaggaaattggagcaatggctctcttcaaccttgctgtgaataacaacgg 60
Query: 882 gaataaggaaatgatgttatcagctggagtattgccagtgttggaggaaatgatttctaa 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaataaggaaatgatgttatcagctggagtattgccagtgttggaggaaatgatttctaa 120
Query: 942 cactagttcttatggttctgcaaccgctctatatctgaatctctcttgccttgaagaagc 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cactagttcttatggttctgcaaccgctctatatctgaatctctcttgccttgaagaagc 180
Query: 1002 caagcctatgattgggacgagtcaggctgtacagttcctcacacagcttcatcaatctga 1061
||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 181 caagcctatgattggtacgagtcaggctgtacagttcctcacccagcttcttcaatctga 240
Query: 1062 ctctcatattcaatgcaagcaagattctctccatgctctctataacctttctaccgtgtc 1121
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctctgatattcaatgcaagcaagattctctccatgctctctataacctttctaccgtgtc 300
Query: 1122 taccaatatcccatacctcctttcat-ccggcattatcaatggcctgcaatcccttcttg 1180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 301 taccaatatcccatacctcctttcattccggcattatcaatggcctgcaatcccttcttg 360
Query: 1181 tagatcagggtgattgcgtgtggacagaaaaatgcatagctgttctgataaacttagcta 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tagatcagggtgattgcgtgtggacagaaaaatgcatagctgttctgataaacttagcta 420
Query: 1241 cttctcaagctggaagggaggaaatggtatcagctcctggactcatcagcgcattggctt 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttctcaagctggaagggaggaaatggtatcagctcctggactcatcagcgcattggctt 480
Query: 1301 ccatattggacattggtgagctcatagtgcaggagcaagcagcctcttgtcttcttattt 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccatattggacattggtgagctcatagtgcaggagcaagcagcctcttgtcttcttattt 540
Query: 1361 tgtgcaacagaagcgagaaatgttgcgagatggtcctgcaagaaggggttatccctgcac 1420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgtgcaacagaagcgagaaatgttgcgagatggtcctgcaagaaggggttatccctgcac 600
Query: 1421 tggtgtcaatatcagtgaatgggaccccaagaggaagggagaaagctcagaaactcttga 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tggtgtcaatatcagtgaatgggaccccaagaggaagggagaaagctcagaaactcttga 660
Query: 1481 tgcttttccgggagcagcgacaacgagaccattcgccagtcgagactcatcagtccccac 1540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgcttttccgggagcagcgacaacgagaccattcgccagtcgagactcatcagtccccac 720
Query: 1541 ctgaaactggtgatttgtctgtgccgcctgctgagatgaaaccgttatgcaagtccatgt 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctgaaactggtgatttgtctgtgccgcctgctgagatgaaaccgttatgcaagtccatgt 780
Query: 1601 ctagaagaaagacaatgaaaggttttggctttttctggaaaaccaagagctattctgttt 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctagaagaaagacaatgaaaggttttggctttttctggaaaaccaagagctattctgttt 840
Query: 1661 accagtgttaa 1671
|||||||||||
Sbjct: 841 accagtgttaa 851
>gnl|LJGI|BW630690 similar to UniRef100_A7QBN6 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 459
Score = 910 bits (459), Expect = 0.0
Identities = 459/459 (100%)
Strand = Plus / Plus
Query: 244 ctcatgtatgatcctgttatcattgcttctgggcaaacttatgaaagggtttgcatagag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcatgtatgatcctgttatcattgcttctgggcaaacttatgaaagggtttgcatagag 60
Query: 304 aaatggttcagtgatgggcataacacgtgcccaaagacccaacaaaaacttcaacatctt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatggttcagtgatgggcataacacgtgcccaaagacccaacaaaaacttcaacatctt 120
Query: 364 tgtttgactcctaattactgtgttaagggtcttgttgctagttggtgtgaacaaaatggt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtttgactcctaattactgtgttaagggtcttgttgctagttggtgtgaacaaaatggt 180
Query: 424 gttcctattcctgaagggcctcctgaatctcttgatcttaactactggagattagtatta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttcctattcctgaagggcctcctgaatctcttgatcttaactactggagattagtatta 240
Query: 484 tccgggtctgaatctacaaattcaagatctgtaaatagtgtcaactcttacaagtcgaaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccgggtctgaatctacaaattcaagatctgtaaatagtgtcaactcttacaagtcgaaa 300
Query: 544 ggtgtcaaagtggttcctctagaagagagtggtatcttagaggaatctgggggaaatgga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtgtcaaagtggttcctctagaagagagtggtatcttagaggaatctgggggaaatgga 360
Query: 604 actgaaattgtgtctgcacaagaggaagatactgagcagcagtattttagttttctaaaa 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actgaaattgtgtctgcacaagaggaagatactgagcagcagtattttagttttctaaaa 420
Query: 664 gtcttgactcgggggaacaattggaagaggaaatgtgaa 702
|||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtcttgactcgggggaacaattggaagaggaaatgtgaa 459
>gnl|LJGI|TC82322 weakly similar to UniRef100_O48700 Cluster: F3I6.27 protein; n=1;
Arabidopsis thaliana|Rep: F3I6.27 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (4%)
Length = 1305
Score = 315 bits (159), Expect = 5e-85
Identities = 238/261 (91%), Gaps = 5/261 (1%)
Strand = Plus / Plus
Query: 615 gtctgcacaagaggaagatactgagcagcagtattttagttttctaaaagtcttgactcg 674
||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 699 gtctgcacaagaggaagatactgagtag---tattttagttttctaaaagtcttgactaa 755
Query: 675 ggggaacaattggaagaggaaatgtgaagtggtggaacagttaaggttgttgctgaggga 734
||||||||||||||||| |||||||||| |||||||| ||| |||| |||||||||||||
Sbjct: 756 ggggaacaattggaagatgaaatgtgaaatggtggaatagtaaaggctgttgctgaggga 815
Query: 735 tgatgaggaagccaggatttttatgggagctaatgggtttgttgaagcccttttgcagtt 794
||||| ||||||| |||||||||||||||||| | |||||||||||||| |||||||||
Sbjct: 816 tgatgtagaagccaagatttttatgggagctaa-gagtttgttgaagcccctttgcagtt 874
Query: 795 cttacaatcagctgtgcatgaaggaaacttgatggctcaggaaattggagcaatggctct 854
||| |||||||||||||||||||||| ||| |||||||||||||||||| ||| |||||
Sbjct: 875 -ttataatcagctgtgcatgaaggaaatttggtggctcaggaaattggagaaattgctct 933
Query: 855 cttcaaccttgctgtgaataa 875
|||||||||||||||||||||
Sbjct: 934 cttcaaccttgctgtgaataa 954
>gnl|LJGI|TC63760
Length = 1257
Score = 299 bits (151), Expect = 3e-80
Identities = 237/261 (90%), Gaps = 6/261 (2%)
Strand = Plus / Plus
Query: 615 gtctgcacaagaggaagatactgagcagcagtattttagttttctaaaagtcttgactcg 674
||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 415 gtctgcacaagaggaagatactgagtag---tattttagttttctaaaagtcttgactaa 471
Query: 675 ggggaacaattggaagaggaaatgtgaagtggtggaacagttaaggttgttgctgaggga 734
||||||||||||||||| |||||||||| |||||||| ||| |||| |||||||||||||
Sbjct: 472 ggggaacaattggaagatgaaatgtgaaatggtggaatagtaaaggctgttgctgaggga 531
Query: 735 tgatgaggaagccaggatttttatgggagctaatgggtttgttgaagcccttttgcagtt 794
||||| ||||||| |||||||||||||||||| | |||||||||||||| |||||||||
Sbjct: 532 tgatgtagaagccaagatttttatgggagctaa-gagtttgttgaagcccctttgcagtt 590
Query: 795 cttacaatcagctgtgcatgaaggaaacttgatggctcaggaaattggagcaatggctct 854
||| |||||||||||||||||||||| ||| ||||||| |||||||||| ||| |||||
Sbjct: 591 -ttataatcagctgtgcatgaaggaaatttggtggctca-gaaattggagaaattgctct 648
Query: 855 cttcaaccttgctgtgaataa 875
|||||||||||||||||||||
Sbjct: 649 cttcaaccttgctgtgaataa 669
>gnl|LJGI|TC80485
Length = 505
Score = 210 bits (106), Expect = 2e-53
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 1566 gcctgctgagatgaaaccgttatgcaagtccatgtctagaagaaagacaatgaaaggttt 1625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcctgctgagatgaaaccgttatgcaagtccatgtctagaagaaagacaatgaaaggttt 60
Query: 1626 tggctttttctggaaaaccaagagctattctgtttaccagtgttaa 1671
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggctttttctggaaaaccaagagctattctgtttaccagtgttaa 106
>gnl|LJGI|BP080337
Length = 469
Score = 151 bits (76), Expect = 2e-35
Identities = 120/134 (89%), Gaps = 3/134 (2%)
Strand = Plus / Minus
Query: 615 gtctgcacaagaggaagatactgagcagcagtattttagttttctaaaagtcttgactcg 674
||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 316 gtctgcacaagaggaagatactgagtag---tattttagttttctaaaagtcttgactaa 260
Query: 675 ggggaacaattggaagaggaaatgtgaagtggtggaacagttaaggttgttgctgaggga 734
||||||||||||||||| |||||||||| |||||||| ||| |||| ||||| |||||||
Sbjct: 259 ggggaacaattggaagatgaaatgtgaaatggtggaatagtaaaggctgttgttgaggga 200
Query: 735 tgatgaggaagcca 748
||||| |||||||
Sbjct: 199 tgatgtagaagcca 186
>gnl|LJGI|AU252019 weakly similar to UniRef100_A7QBN6 Cluster: Chromosome chr1
scaffold_75, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_75, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 329
Score = 133 bits (67), Expect = 4e-30
Identities = 160/191 (83%)
Strand = Plus / Plus
Query: 1075 tgcaagcaagattctctccatgctctctataacctttctaccgtgtctaccaatatccca 1134
||||||| |||||| |||||||| |||||||| |||||||| ||||| | ||||| ||
Sbjct: 116 tgcaagctagattccctccatgcactctataatctttctactgtgtcctctaatatttca 175
Query: 1135 tacctcctttcatccggcattatcaatggcctgcaatcccttcttgtagatcagggtgat 1194
|||||||||||||| ||||| || ||||| || || ||||||||||||| |||| |||
Sbjct: 176 tacctcctttcatcaggcatcatgaatggtctacagtcccttcttgtaggccaggatgac 235
Query: 1195 tgcgtgtggacagaaaaatgcatagctgttctgataaacttagctacttctcaagctgga 1254
| | ||||||||||||| ||||| |||||| |||||||||| ||| |||||||| ||||
Sbjct: 236 tccatgtggacagaaaagtgcattgctgttttgataaacttggctgtttctcaagttgga 295
Query: 1255 agggaggaaat 1265
|| || |||||
Sbjct: 296 agagaagaaat 306