Miyakogusa Predicted Gene
- Lj4g3v2928720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2928720.1 Non Chatacterized Hit- tr|D7TW20|D7TW20_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,52.21,3e-19,seg,NULL; coiled-coil,NULL; FAMILY NOT NAMED,NULL;
Remorin_C,Remorin, C-terminal,CUFF.51869.1
(540 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58521 weakly similar to UniRef100_A7QZ54 Cluster: Chr... 987 0.0
gnl|LJGI|AW719560 weakly similar to UniRef100_A7QIT0 Cluster: Ch... 502 e-141
gnl|LJGI|TC66356 weakly similar to UniRef100_A7QZ54 Cluster: Chr... 502 e-141
gnl|LJGI|TC70588 weakly similar to UniRef100_A4J4Y1 Cluster: Ser... 400 e-111
gnl|LJGI|FS350923 weakly similar to UniRef100_A7PZA3 Cluster: Ch... 248 3e-65
gnl|LJGI|TC74562 weakly similar to UniRef100_Q8LC13 Cluster: Rem... 94 1e-18
>gnl|LJGI|TC58521 weakly similar to UniRef100_A7QZ54 Cluster: Chromosome undetermined
scaffold_265, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_265,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (93%)
Length = 897
Score = 987 bits (498), Expect = 0.0
Identities = 526/540 (97%)
Strand = Plus / Plus
Query: 1 atgggagaagaagagaccaaacattgtgatcagtgtggggcgtctgcatctgcctctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 atgggagaagaagagaccaaacattgtgatcagtgtggggcgtctgcatctgcctctgcc 91
Query: 61 tctgaggccacagtactatctcaactacggctctccgaagtcctcaaactcaaagaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 tctgaggccacagtactatctcaactacggctctccgaagtcctcaaactcaaagaatcc 151
Query: 121 caaaacgctgaatcttcaaacagcactctaacaattacaagacaagggagcacaactaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 caaaacgctgaatcttcaaacagcactctaacaattacaagacaagggagcacaactaac 211
Query: 181 ccttcttatccacttgatcaagatcttgatgctgaaacagacaatataaatacttcaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ccttcttatccacttgatcaagatcttgatgctgaaacagacaatataaatacttcaatt 271
Query: 241 gatagagatgctgttcttgcaagagttgaatcacagaaaagattggctttgattaaagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gatagagatgctgttcttgcaagagttgaatcacagaaaagattggctttgattaaagca 331
Query: 301 tgggaagaaaatgagaagacaaaagtagataacaaggcatataagttgcaatgtgctgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgggaagaaaatgagaagacaaaagtagataacaaggcatataagttgcaatgtgctgtt 391
Query: 361 gatatgtgggagaaaactaagaaagcatctactcaggcnnnnnnnnnnnnnnttgaggaa 420
|||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 392 gatatgtgggagaaaactaagaaagcatctactcaggcaaaaatcaaaaaaattgaggaa 451
Query: 421 aatatggacagaaagaaagctgattatgttgaaataatgcaaaacaaaattgctgaaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aatatggacagaaagaaagctgattatgttgaaataatgcaaaacaaaattgctgaaact 511
Query: 481 catcgactagcagatgagaagaaagcactgattgaagctcaaaagggggaggaagtcctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 catcgactagcagatgagaagaaagcactgattgaagctcaaaagggggaggaagtcctc 571
>gnl|LJGI|AW719560 weakly similar to UniRef100_A7QIT0 Cluster: Chromosome chr2
scaffold_105, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_105, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (76%)
Length = 480
Score = 502 bits (253), Expect = e-141
Identities = 281/295 (95%)
Strand = Plus / Plus
Query: 246 agatgctgttcttgcaagagttgaatcacagaaaagattggctttgattaaagcatggga 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 agatgctgttcttgcaagagttgaatcacagaaaagattggctttgattaaagcatggga 100
Query: 306 agaaaatgagaagacaaaagtagataacaaggcatataagttgcaatgtgctgttgatat 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 agaaaatgagaagacaaaagtagataacaaggcatataagttgcaatgtgctgttgatat 160
Query: 366 gtgggagaaaactaagaaagcatctactcaggcnnnnnnnnnnnnnnttgaggaaaatat 425
||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 161 gtgggagaaaactaagaaagcatctactcaggcaaaaatcaaaaaaattgaggaaaatat 220
Query: 426 ggacagaaagaaagctgattatgttgaaataatgcaaaacaaaattgctgaaactcatcg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ggacagaaagaaagctgattatgttgaaataatgcaaaacaaaattgctgaaactcatcg 280
Query: 486 actagcagatgagaagaaagcactgattgaagctcaaaagggggaggaagtcctc 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 actagcagatgagaagaaagcactgattgaagctcaaaagggggaggaagtcctc 335
>gnl|LJGI|TC66356 weakly similar to UniRef100_A7QZ54 Cluster: Chromosome undetermined
scaffold_265, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_265,
whole genome shotgun sequence - Vitis vinifera (Grape),
complete
Length = 725
Score = 502 bits (253), Expect = e-141
Identities = 281/295 (95%)
Strand = Plus / Plus
Query: 246 agatgctgttcttgcaagagttgaatcacagaaaagattggctttgattaaagcatggga 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 agatgctgttcttgcaagagttgaatcacagaaaagattggctttgattaaagcatggga 290
Query: 306 agaaaatgagaagacaaaagtagataacaaggcatataagttgcaatgtgctgttgatat 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 agaaaatgagaagacaaaagtagataacaaggcatataagttgcaatgtgctgttgatat 350
Query: 366 gtgggagaaaactaagaaagcatctactcaggcnnnnnnnnnnnnnnttgaggaaaatat 425
||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 351 gtgggagaaaactaagaaagcatctactcaggcaaaaatcaaaaaaattgaggaaaatat 410
Query: 426 ggacagaaagaaagctgattatgttgaaataatgcaaaacaaaattgctgaaactcatcg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ggacagaaagaaagctgattatgttgaaataatgcaaaacaaaattgctgaaactcatcg 470
Query: 486 actagcagatgagaagaaagcactgattgaagctcaaaagggggaggaagtcctc 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 actagcagatgagaagaaagcactgattgaagctcaaaagggggaggaagtcctc 525
Score = 404 bits (204), Expect = e-112
Identities = 204/204 (100%)
Strand = Plus / Plus
Query: 1 atgggagaagaagagaccaaacattgtgatcagtgtggggcgtctgcatctgcctctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 atgggagaagaagagaccaaacattgtgatcagtgtggggcgtctgcatctgcctctgcc 90
Query: 61 tctgaggccacagtactatctcaactacggctctccgaagtcctcaaactcaaagaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 tctgaggccacagtactatctcaactacggctctccgaagtcctcaaactcaaagaatcc 150
Query: 121 caaaacgctgaatcttcaaacagcactctaacaattacaagacaagggagcacaactaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 caaaacgctgaatcttcaaacagcactctaacaattacaagacaagggagcacaactaac 210
Query: 181 ccttcttatccacttgatcaagat 204
||||||||||||||||||||||||
Sbjct: 211 ccttcttatccacttgatcaagat 234
>gnl|LJGI|TC70588 weakly similar to UniRef100_A4J4Y1 Cluster: Serine-type D-Ala-D-Ala
carboxypeptidase precursor; n=1; Desulfotomaculum
reducens MI-1|Rep: Serine-type D-Ala-D-Ala
carboxypeptidase precursor - Desulfotomaculum reducens
(strain MI-1), partial (6%)
Length = 785
Score = 400 bits (202), Expect = e-111
Identities = 202/202 (100%)
Strand = Plus / Plus
Query: 1 atgggagaagaagagaccaaacattgtgatcagtgtggggcgtctgcatctgcctctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atgggagaagaagagaccaaacattgtgatcagtgtggggcgtctgcatctgcctctgcc 184
Query: 61 tctgaggccacagtactatctcaactacggctctccgaagtcctcaaactcaaagaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tctgaggccacagtactatctcaactacggctctccgaagtcctcaaactcaaagaatcc 244
Query: 121 caaaacgctgaatcttcaaacagcactctaacaattacaagacaagggagcacaactaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 caaaacgctgaatcttcaaacagcactctaacaattacaagacaagggagcacaactaac 304
Query: 181 ccttcttatccacttgatcaag 202
||||||||||||||||||||||
Sbjct: 305 ccttcttatccacttgatcaag 326
Score = 93.7 bits (47), Expect = 1e-18
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 201 agatcttgatgctgaaacagacaatataaatacttcaattgatagag 247
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 agatcttgatgctgaaacagacaatataaatacttcaattgatagag 751
>gnl|LJGI|FS350923 weakly similar to UniRef100_A7PZA3 Cluster: Chromosome chr15
scaffold_40, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_40, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (30%)
Length = 645
Score = 248 bits (125), Expect = 3e-65
Identities = 125/125 (100%)
Strand = Plus / Minus
Query: 416 aggaaaatatggacagaaagaaagctgattatgttgaaataatgcaaaacaaaattgctg 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aggaaaatatggacagaaagaaagctgattatgttgaaataatgcaaaacaaaattgctg 261
Query: 476 aaactcatcgactagcagatgagaagaaagcactgattgaagctcaaaagggggaggaag 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaactcatcgactagcagatgagaagaaagcactgattgaagctcaaaagggggaggaag 201
Query: 536 tcctc 540
|||||
Sbjct: 200 tcctc 196
Score = 127 bits (64), Expect = 8e-29
Identities = 67/68 (98%)
Strand = Plus / Minus
Query: 331 aacaaggcatataagttgcaatgtgctgttgatatgtgggagaaaactaagaaagcatct 390
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aacagggcatataagttgcaatgtgctgttgatatgtgggagaaaactaagaaagcatct 430
Query: 391 actcaggc 398
||||||||
Sbjct: 429 actcaggc 422
Score = 81.8 bits (41), Expect = 4e-15
Identities = 41/41 (100%)
Strand = Plus / Minus
Query: 296 aagcatgggaagaaaatgagaagacaaaagtagataacaag 336
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aagcatgggaagaaaatgagaagacaaaagtagataacaag 605
>gnl|LJGI|TC74562 weakly similar to UniRef100_Q8LC13 Cluster: Remorin; n=1;
Arabidopsis thaliana|Rep: Remorin - Arabidopsis thaliana
(Mouse-ear cress), partial (62%)
Length = 1008
Score = 93.7 bits (47), Expect = 1e-18
Identities = 89/103 (86%)
Strand = Plus / Plus
Query: 239 ttgatagagatgctgttcttgcaagagttgaatcacagaaaagattggctttgattaaag 298
|||| |||||||||| ||||||||||||| | || | |||||||||||| |||||||||
Sbjct: 475 ttgacagagatgctgcgcttgcaagagttgtaacagaaaaaagattggctctgattaaag 534
Query: 299 catgggaagaaaatgagaagacaaaagtagataacaaggcata 341
|||||||||||| ||| | |||||||| ||| |||| ||||||
Sbjct: 535 catgggaagaaagtgaaaggacaaaagcagagaacagggcata 577