Miyakogusa Predicted Gene
- Lj4g3v2883290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2883290.1 Non Chatacterized Hit- tr|I3SSW2|I3SSW2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,100,0,UBIQUITIN_2,Ubiquitin supergroup; Rad60-SLD_2,NULL;
UBIQUITIN-LIKE PROTEIN 3 (HCG-1 PROTEIN),NULL; U,CUFF.51891.1
(357 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58966 similar to UniRef100_A7PHL4 Cluster: Chromosome... 708 0.0
gnl|LJGI|BP065022 similar to UniRef100_A7PHL4 Cluster: Chromosom... 119 1e-26
gnl|LJGI|TC66108 similar to UniRef100_A7PHL4 Cluster: Chromosome... 64 6e-10
>gnl|LJGI|TC58966 similar to UniRef100_A7PHL4 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 819
Score = 708 bits (357), Expect = 0.0
Identities = 357/357 (100%)
Strand = Plus / Plus
Query: 1 atgccggaagaggacttggttgacatcaagtttaggttgtacgatggctccgatatcggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 atgccggaagaggacttggttgacatcaagtttaggttgtacgatggctccgatatcggg 264
Query: 61 cctttcaggtactcctccgccgccaccgtcgacatgcttaagcaaagggttgtctctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctttcaggtactcctccgccgccaccgtcgacatgcttaagcaaagggttgtctctgat 324
Query: 121 tggcccaaaggtaagacagtcataccaaagtcagcaaatgaagtgaaattgattagttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggcccaaaggtaagacagtcataccaaagtcagcaaatgaagtgaaattgattagttct 384
Query: 181 ggtaaaatcttggaaaacaacaagactgttggtcagtgtaaagtcccatttggtgagact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtaaaatcttggaaaacaacaagactgttggtcagtgtaaagtcccatttggtgagact 444
Query: 241 gcagggggtgttatcatgcatgttgttgtacagccatctctagcaaaatctaaagctgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcagggggtgttatcatgcatgttgttgtacagccatctctagcaaaatctaaagctgaa 504
Query: 301 aagaaggttgatgattctcccaagaaggtcgtctgttcttgttccatattgtgaaga 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagaaggttgatgattctcccaagaaggtcgtctgttcttgttccatattgtgaaga 561
>gnl|LJGI|BP065022 similar to UniRef100_A7PHL4 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 475
Score = 119 bits (60), Expect = 1e-26
Identities = 60/60 (100%)
Strand = Plus / Minus
Query: 298 gaaaagaaggttgatgattctcccaagaaggtcgtctgttcttgttccatattgtgaaga 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gaaaagaaggttgatgattctcccaagaaggtcgtctgttcttgttccatattgtgaaga 308
>gnl|LJGI|TC66108 similar to UniRef100_A7PHL4 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 1009
Score = 63.9 bits (32), Expect = 6e-10
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 142 ataccaaagtcagcaaatgaagtgaaattgattagttctggtaaaatcttggaaaacaac 201
||||||||| | |||||||| | ||| |||| ||| |||| ||||| ||||| ||||||
Sbjct: 462 ataccaaaggccgcaaatgatataaaactgataagtgctggcaaaattttggagaacaac 521
Query: 202 aagactgttggtcagtgtaaagtcccatttggtgag 237
||||| ||||| ||||||| ||| || |||||||||
Sbjct: 522 aagacagttggccagtgtagagtaccttttggtgag 557