Miyakogusa Predicted Gene
- Lj4g3v2882140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2882140.1 Non Chatacterized Hit- tr|F6GTF0|F6GTF0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,29.74,3e-17,STERILE ALPHA MOTIF (SAM) DOMAIN-CONTAINING
PROTEIN,NULL; SCP160,NULL; Sterile alpha motif.,Sterile ,CUFF.51821.1
(929 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79042 similar to UniRef100_A7QUQ7 Cluster: Chromosome... 932 0.0
gnl|LJGI|TC72719 homologue to UniRef100_A7QUQ7 Cluster: Chromoso... 842 0.0
gnl|LJGI|TC77309 similar to UniRef100_A7QUQ7 Cluster: Chromosome... 78 1e-13
>gnl|LJGI|TC79042 similar to UniRef100_A7QUQ7 Cluster: Chromosome chr1 scaffold_180,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_180, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 859
Score = 932 bits (470), Expect = 0.0
Identities = 473/474 (99%)
Strand = Plus / Plus
Query: 456 ggaggaaaagtacagtggcggcgatgatgatgtggatgatgggtatcgggaatttgatat 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 ggaggaaaagtacagtggcggcgatgatgatgtggatgatgggtatcgggaatttgatat 136
Query: 516 ggagaattcggattctctgttgaaagaacagagccctattcaatctatggagaatttggg 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ggagaattcggattctctgttgaaagaacagagccctattcaatctatggagaatttggg 196
Query: 576 ggttgatgggcataggaggtcgtttaagggtagtagggatcaccatgatgggattgagct 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ggttgatgggcataggaggtcgtttaagggtagtagggatcaccatgatgggattgagct 256
Query: 636 atctgggccttctgatactgatgcaagggattggaagtgtggagggactagtggtggtga 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atctgggccttctgatactgatgcaagggattggaagtgtggagggactagtggtggtga 316
Query: 696 taggaatgagaatggtggtgggagggtcaggtctggtgaagatggggttaggatttggct 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 taggaatgagaatggtggtgggagggtcaggtctggtgaagatggggttaggatttggct 376
Query: 756 caatgggttggggttagggcgttatgcgccggtgtttgaagtgcatgaggttgatgatga 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 caatgggttggggttagggcgttatgcgccggtgtttgaagtgcatgaggttgatgatga 436
Query: 816 ggttttgccaatgttgacactagaggatctcaaagatatggggattagtgctgttggatc 875
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ggttttgcccatgttgacactagaggatctcaaagatatggggattagtgctgttggatc 496
Query: 876 caggagaaaaatgtactgtgctattcagaagcttggaaagggcttctcctgagc 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 caggagaaaaatgtactgtgctattcagaagcttggaaagggcttctcctgagc 550
Score = 101 bits (51), Expect = 8e-21
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 153 ccgaagcaccagcagcaaggggtggaagctcggcttcgaccaccgcaagga 203
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 ccgaagcaccagcagcaaggggtggaagctcggcttcgaccaccgcaagga 79
>gnl|LJGI|TC72719 homologue to UniRef100_A7QUQ7 Cluster: Chromosome chr1
scaffold_180, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_180, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 605
Score = 842 bits (425), Expect = 0.0
Identities = 425/425 (100%)
Strand = Plus / Plus
Query: 1 atggctgagattcatgcggcggagggtcagctcaacggcgccggaaacctaattctgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atggctgagattcatgcggcggagggtcagctcaacggcgccggaaacctaattctgaac 176
Query: 61 tccttggaacccatcggaaccaagcgccagaggaggcctagcgtccgattaggcgacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tccttggaacccatcggaaccaagcgccagaggaggcctagcgtccgattaggcgacatc 236
Query: 121 ggcggcgaccaaccgcacgaatcccaccaccgccgaagcaccagcagcaaggggtggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ggcggcgaccaaccgcacgaatcccaccaccgccgaagcaccagcagcaaggggtggaag 296
Query: 181 ctcggcttcgaccaccgcaaggaaaaggattccaccgccgctaacccatcatcaggtaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ctcggcttcgaccaccgcaaggaaaaggattccaccgccgctaacccatcatcaggtaat 356
Query: 241 aaaccctccaagactcgacccttaaccaatttgacctccgtcgccgacttcaatgaaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aaaccctccaagactcgacccttaaccaatttgacctccgtcgccgacttcaatgaaacc 416
Query: 301 ctagacggcgacgagagggaagggaacaacatcgacagcgtcgcgattggtagctggaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ctagacggcgacgagagggaagggaacaacatcgacagcgtcgcgattggtagctggaag 476
Query: 361 gtgaaagagtccaagaagagggccaccaagagggtcagatcgagttgggtctcgagaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gtgaaagagtccaagaagagggccaccaagagggtcagatcgagttgggtctcgagaatc 536
Query: 421 gagga 425
|||||
Sbjct: 537 gagga 541
Score = 75.8 bits (38), Expect = 4e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 452 aaggggaggaaaagtacagtggcggcgatgatgatgtg 489
||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aaggggaggaaaagtacagtggcggcgatgatgatgtg 605
>gnl|LJGI|TC77309 similar to UniRef100_A7QUQ7 Cluster: Chromosome chr1 scaffold_180,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_180, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 1141
Score = 77.8 bits (39), Expect = 1e-13
Identities = 93/111 (83%)
Strand = Plus / Plus
Query: 799 catgaggttgatgatgaggttttgccaatgttgacactagaggatctcaaagatatgggg 858
|||||||| ||||||||| || | ||||||||||| | ||||||||||| ||||||||
Sbjct: 603 catgaggtggatgatgagcttcttccaatgttgaccttggaggatctcaaggatatgggt 662
Query: 859 attagtgctgttggatccaggagaaaaatgtactgtgctattcagaagctt 909
|| | ||||||||| ||||| || || |||||| ||| ||||||||||||
Sbjct: 663 ataaatgctgttggttccagaaggaagatgtacactgcaattcagaagctt 713