Miyakogusa Predicted Gene
- Lj4g3v2882120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2882120.1 Non Chatacterized Hit- tr|C0JP26|C0JP26_LOTJA
Putative basic helix-loop-helix protein BHLH8
OS=Lotus,99.64,0,HLH,Helix-loop-helix domain; HLH, helix-loop-helix
DNA-binding domain,Helix-loop-helix domain; seg,N,CUFF.51817.1
(987 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV424133 similar to UniRef100_A8TLW5 Cluster: BHLH tran... 206 2e-52
gnl|LJGI|TC69651 homologue to UniRef100_A8TLW5 Cluster: BHLH tra... 107 1e-22
gnl|LJGI|BW599233 UniRef100_Q89FQ7 Cluster: Blr6642 protein; n=1... 88 1e-16
gnl|LJGI|TC71238 weakly similar to UniRef100_Q45GJ7 Cluster: Exp... 84 2e-15
gnl|LJGI|CB828026 similar to UniRef100_A7PNA9 Cluster: Chromosom... 52 7e-06
gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome... 52 7e-06
>gnl|LJGI|AV424133 similar to UniRef100_A8TLW5 Cluster: BHLH transcription factor
Upa20; n=1; Capsicum annuum|Rep: BHLH transcription
factor Upa20 - Capsicum annuum (Bell pepper), partial
(19%)
Length = 307
Score = 206 bits (104), Expect = 2e-52
Identities = 193/222 (86%), Gaps = 3/222 (1%)
Strand = Plus / Plus
Query: 496 aggatgaacatgttgcagcaacttgtgccaggctgtgataaggtaacagggaaggccctt 555
|||||||| | ||||||| |||||||||||||||||||||||| || || |||||||||
Sbjct: 6 aggatgaaaaggttgcagagacttgtgccaggctgtgataaggtgactggaaaggccctt 65
Query: 556 gtgttggaggaaataatcaattatgttcagtccctacaacatcaagtagagtttttgtca 615
||||||| ||||||||||||||||||||||| |||| ||||||| ||||| ||||||
Sbjct: 66 atgttggatgaaataatcaattatgttcagtcattacagaatcaagtggagttcttgtca 125
Query: 616 atgaaacttgcttcagtgaatcccatgctctttgatatggccatggatctagacaatctc 675
||||| |||||||| |||||||||||| ||| ||||||||| | || ||||||| |||
Sbjct: 126 atgaagcttgcttctgtgaatcccatgttctatgatatggcaactgacctagacaccctc 185
Query: 676 ttggttagaccagaacagaaagtaaatagcttagcatcacca 717
||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 186 ttggttagaccag---agaaattaaatagcttagcatcacca 224
>gnl|LJGI|TC69651 homologue to UniRef100_A8TLW5 Cluster: BHLH transcription factor
Upa20; n=1; Capsicum annuum|Rep: BHLH transcription
factor Upa20 - Capsicum annuum (Bell pepper), partial
(5%)
Length = 1071
Score = 107 bits (54), Expect = 1e-22
Identities = 120/142 (84%)
Strand = Plus / Plus
Query: 302 aagggggaagcaagaaacaaaagaagggtaatggtggggtgaaagaagaggacatggcaa 361
||||| ||||||||||||| |||||| | ||||||||||||||||| |||||| |||||
Sbjct: 924 aagggagaagcaagaaacagaagaagagcaatggtggggtgaaagatcaggacaaggcaa 983
Query: 362 aagaagagaagaaggataagaaaaagggccctgaagagccctcaacaggctatatccatg 421
| |||| ||| || ||| ||| | || ||||||||| ||||||||||||||||||
Sbjct: 984 gaactgagaggaaagaacagagaaaatgtccggaagagcccccaacaggctatatccatg 1043
Query: 422 tcagagcaagaaggggccaggc 443
|||||||||||||||| |||||
Sbjct: 1044 tcagagcaagaaggggtcaggc 1065
>gnl|LJGI|BW599233 UniRef100_Q89FQ7 Cluster: Blr6642 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr6642 protein - Bradyrhizobium
japonicum, partial (5%)
Length = 481
Score = 87.7 bits (44), Expect = 1e-16
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 944 atccatatggatacggcaacaattcatgttccttaaattaatat 987
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 atccatatggatacggcaacaattcatgttccttaaattaatat 48
>gnl|LJGI|TC71238 weakly similar to UniRef100_Q45GJ7 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (3%)
Length = 565
Score = 83.8 bits (42), Expect = 2e-15
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 302 aagggggaagcaagaaacaaaagaagggtaatggtggggtgaaagaagaggacatggcaa 361
||||| ||||||||||||| |||||| | ||||||||||||||||| |||||| |||||
Sbjct: 444 aagggagaagcaagaaacagaagaagagcaatggtggggtgaaagatcaggacaaggcaa 503
Query: 362 aagaagagaagaaggataagaaaaagggccctgaagagccctcaacaggctatatccatg 421
| |||||||| || ||| ||| | || ||||||||| ||||||||||||||||||
Sbjct: 504 gaactgagaagaaagaacagagaaaatgtccggaagagcccccaacaggctatatccatg 563
Query: 422 tc 423
||
Sbjct: 564 tc 565
>gnl|LJGI|CB828026 similar to UniRef100_A7PNA9 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 526
Score = 52.0 bits (26), Expect = 7e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 442 gcaacagatagccacagccttgctgaaagggtgagaagagagaaaataagtgagaggatg 501
|||||| |||| ||||||||||| || || ||||| || || || |||||||||||||||
Sbjct: 137 gcaacaaatagtcacagccttgcagagagagtgaggagggaaaagataagtgagaggatg 196
Query: 502 aa 503
||
Sbjct: 197 aa 198
>gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome chr5 scaffold_58,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_58, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 1046
Score = 52.0 bits (26), Expect = 7e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 418 catgtcagagcaagaaggggccaggcaacagatagccacagccttgctgaaagggtgaga 477
||||| ||||||||||| || || || || |||||||| || ||||| ||||| || ||
Sbjct: 63 catgtgagagcaagaagaggtcaagctactgatagccatagtcttgcggaaagagttcga 122
Query: 478 agagagaaaataagtgagaggatgaa 503
|| |||||||| ||||| ||||||||
Sbjct: 123 agggagaaaatcagtgaaaggatgaa 148