Miyakogusa Predicted Gene
- Lj4g3v2882100.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2882100.2 tr|G7LI47|G7LI47_MEDTR Poly(A) polymerase
OS=Medicago truncatula GN=MTR_8g099900 PE=3
SV=1,76.99,0,POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN,NULL;
TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A) POLYMERA,CUFF.51815.2
(1560 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC595741 similar to UniRef100_Q8VXU8 Cluster: AT5g23690... 1031 0.0
gnl|LJGI|TC69662 weakly similar to UniRef100_Q8VXU8 Cluster: AT5... 1029 0.0
gnl|LJGI|TC78465 similar to UniRef100_A7QT56 Cluster: Chromosome... 926 0.0
gnl|LJGI|GO018966 weakly similar to UniRef100_A7QT56 Cluster: Ch... 295 4e-79
gnl|LJGI|TC66679 weakly similar to UniRef100_A7QT56 Cluster: Chr... 234 1e-60
gnl|LJGI|FS327446 weakly similar to UniRef100_Q8VXU8 Cluster: AT... 123 4e-27
>gnl|LJGI|DC595741 similar to UniRef100_Q8VXU8 Cluster: AT5g23690/MQM1_4; n=1;
Arabidopsis thaliana|Rep: AT5g23690/MQM1_4 - Arabidopsis
thaliana (Mouse-ear cress), partial (18%)
Length = 572
Score = 1031 bits (520), Expect = 0.0
Identities = 520/520 (100%)
Strand = Plus / Plus
Query: 1 atgatggctactgctactactctcaaattcgtctgcaaacccaatcttcatcttcgcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 atgatggctactgctactactctcaaattcgtctgcaaacccaatcttcatcttcgcatc 112
Query: 61 gctccattccaatgtgttcgcaaggttgtcccaagatctgttcccccggctgaggcagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 gctccattccaatgtgttcgcaaggttgtcccaagatctgttcccccggctgaggcagag 172
Query: 121 gaatgtagcggtggttcaattcgtgaacaagaaaataagaagaccccagcttggaagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gaatgtagcggtggttcaattcgtgaacaagaaaataagaagaccccagcttggaagaaa 232
Query: 181 ttgaattctaaagagcttggacttcgaaattccatgatagcacatccaaccaaaagggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ttgaattctaaagagcttggacttcgaaattccatgatagcacatccaaccaaaagggtt 292
Query: 241 ctgagcactctgaagaaaaaggggtatgatgtatatcttgttggaggttgtgtacgggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ctgagcactctgaagaaaaaggggtatgatgtatatcttgttggaggttgtgtacgggat 352
Query: 301 cttatactaaaacaaacaccaaaagactttgatattttaacttctgcggatcttaaagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cttatactaaaacaaacaccaaaagactttgatattttaacttctgcggatcttaaagag 412
Query: 361 gtcatgagatcattttcatggtgtgagatagttggtaaaaggttcccaatatgtcatgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gtcatgagatcattttcatggtgtgagatagttggtaaaaggttcccaatatgtcatgtc 472
Query: 421 catatggatggcactgttgttgaggtttcaagttttaatactaataaattcaagccgcgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 catatggatggcactgttgttgaggtttcaagttttaatactaataaattcaagccgcgt 532
Query: 481 acacgctttgtgcatgatattgaggcacccaatggctgtg 520
||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 acacgctttgtgcatgatattgaggcacccaatggctgtg 572
>gnl|LJGI|TC69662 weakly similar to UniRef100_Q8VXU8 Cluster: AT5g23690/MQM1_4; n=1;
Arabidopsis thaliana|Rep: AT5g23690/MQM1_4 - Arabidopsis
thaliana (Mouse-ear cress), partial (24%)
Length = 1300
Score = 1029 bits (519), Expect = 0.0
Identities = 615/647 (95%)
Strand = Plus / Plus
Query: 914 aggctgtttattttgttcaccatcgatttcggaggcgggacaaaagaaccaatatgcttt 973
||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 627 aggctatttattttgttcaccgtcgatttcggaggcgggacaaaagaaccaatttgcttt 686
Query: 974 tgtctttgttctccaatttggataaacttttggcaccaaaccgaccatgtcacagcagct 1033
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 687 tgtctttgttctccaatttggataaacttttggcaccaaaccgaccatgtcccagcagct 746
Query: 1034 tatgggttggtatccttgcattacacaaaacattgagtgatcaaccaaggaatcccttgg 1093
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 747 tatgggttggtatccttgcattacacaaaacattgagtgatcaactaaggaatcccttgg 806
Query: 1094 ttgttgctgcatttagccttgcagttcataatggtggaaatttgttggaagcagtagaca 1153
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 807 ttgttgcagcatttagccttgcagttcataatggtggaaatttgttggaagcaatagaca 866
Query: 1154 tatctaggaggatcaaccaacctcatgatgacagatttcctgaattgttagatccttcgg 1213
||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 867 tatctaggaggatcaacaaacctcatgatgacaaatttcctgaattattagatccttcgg 926
Query: 1214 atctggaagcagaggctttggcagatgagattttggatcttgcagagtctgttaaagagt 1273
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 927 atctggatgcagaggctttggcagatgagattttggatcttgaggagtctgttaaagaga 986
Query: 1274 cactgttacagatgacaactaggcatatggtatctcaagctatggctgactatcctcaag 1333
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 cactattacagatgacaactaggcatatggtatctcaagctatggctgactatcctcaag 1046
Query: 1334 ctcctcattcagatatggttttcatccctttaggaatgtacctaaaaactgtcagtattt 1393
|||||||| ||||||||||||||||| |||||||||||||||||||| || | |||||||
Sbjct: 1047 ctcctcatccagatatggttttcatctctttaggaatgtacctaaaagctataagtattt 1106
Query: 1394 ttgattgcctgagagcaagggctggtaggaaatttttgtcaaagcaagataggaaaactg 1453
|| ||||| | |||||||||||||||||||| |||||||||||||||| || |||||||
Sbjct: 1107 tttattgcttaagagcaagggctggtaggaattttttgtcaaagcaagttataaaaactg 1166
Query: 1454 attacgagtccttagcacatggtgacctgcaagaagtacggcacatgttagcaatggttg 1513
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1167 attacgagtccttagctcatggtgacctgcaagaagtatggcacatgttagcaatggttg 1226
Query: 1514 tatttgataccatatatccactgcacttggaccgagatcagtcttga 1560
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1227 tatttgatattgtatatccactgcacttggaccgagatcagtcttga 1273
>gnl|LJGI|TC78465 similar to UniRef100_A7QT56 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 767
Score = 926 bits (467), Expect = 0.0
Identities = 606/654 (92%), Gaps = 20/654 (3%)
Strand = Plus / Plus
Query: 914 aggctgtttattttgttcaccatcgatttcggaggcgggacaaaagaaccaatatgcttt 973
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 18 aggctgtttattttgttcaccatcgatttcggaggcgggacaaaagaaccaatttgcttt 77
Query: 974 tgtctttgttctccaatttggataaacttttggcaccaaaccgaccatgtcacagcagct 1033
|||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 78 tgtctttgttctccaatttggataaacttttggcaccaaa--gaccatgtcacatcagct 135
Query: 1034 tatgggttggtatccttgcattacacaaaacattgagtgatcaaccaaggaatcccttgg 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tatgggttggtatccttgcattacacaaaacattgagtgatcaaccaaggaatcccttgg 195
Query: 1094 ttgttgctgcatttagccttgcagttcataatggtggaaatttgttggaagcagtagaca 1153
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 196 ttgttgctgcatttagacttgcagttcatagtggtggaaatttgttggaagcagtagaca 255
Query: 1154 tatctaggaggatcaaccaacctcatgatgacagatttcctg-------aattgttagat 1206
||||||||||||||||| |||| |||||||||||||||| || |||| ||||||
Sbjct: 256 tatctaggaggatcaacaaaccgcatgatgacagatttcttgaattataaattattagat 315
Query: 1207 ccttcggatctggaagcagaggctttggcagatgagattttggatcttgcagagtctgtt 1266
|||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 316 acttcagatctggatgcagaggctttggcagatgagattttggatcttgcggagtctgtt 375
Query: 1267 aaagagtcactgttacagatgacaactaggcatatggtatctcaagctatggctgactat 1326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aaagagtcactgttacagatgacaactaggcatatggtatctcaagctatggctgactat 435
Query: 1327 cctcaagctcctcattcagatatggttttcatccctttaggaatgtacctaaaaactgtc 1386
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 436 cctcaagctcctcattcagatatggttttcatccctttaggaatgttcctaaaagctgtc 495
Query: 1387 agtatttttgattgcctgagagcaagggctggtaggaaatttttgtcaaagcaagatagg 1446
|||||||||||||| | |||||||||| |||||||||||||||||||||||||| |||
Sbjct: 496 agtatttttgattgtttaagagcaagggttggtaggaaatttttgtcaaagcaaggtaga 555
Query: 1447 aaaactgattacgagtccttagcacatggtgacctgcaagaagtacggcacatgttagca 1506
|||||||||| |||||||||| |||||||||||||| ||||||||||||
Sbjct: 556 aaaactgattttgagtccttag-----------ctgcaagaagtacgacacatgttagca 604
Query: 1507 atggttgtatttgataccatatatccactgcacttggaccgagatcagtcttga 1560
||||||||||||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 605 atggttgtatttgatactgtatatccactgcacggggacccagatcagtcttga 658
>gnl|LJGI|GO018966 weakly similar to UniRef100_A7QT56 Cluster: Chromosome chr1
scaffold_166, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_166, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (41%)
Length = 615
Score = 295 bits (149), Expect = 4e-79
Identities = 359/429 (83%)
Strand = Plus / Plus
Query: 497 atattgaggcacccaatggctgtgacaatgaggattttcttcgctggaagaattgtttga 556
||||||| |||| |||||||||||||| ||||| || || |||| ||||||| | |
Sbjct: 187 atattgaagcacttaatggctgtgacaagaaggatcatcaacgatggatgaattgtataa 246
Query: 557 atcgagacttcacaattaacgggttgatgttcgatccgtatgcaaaaattgtttatgatt 616
| | ||||| |||||||| || |||||| | ||||| ||||||| ||||||||||||||
Sbjct: 247 accaggactttacaattaatggattgatgcttgatccctatgcaagaattgtttatgatt 306
Query: 617 acatgggagggatggaagatattgtaaaagctaaagtgcgaactgtggttcctgcagcta 676
||| |||||| || ||||||||| ||||||||||||||||||| | |||| | | ||
Sbjct: 307 acacgggaggaatagaagatattcaaaaagctaaagtgcgaactataattccgggcgata 366
Query: 677 cttcttttcaggaggattgtgctcgcattctacgcgctattaggattgctgctcgcttag 736
|||| |||||||| |||| |||||||||||||||||| ||||| |||||||||| |||||
Sbjct: 367 cttcatttcaggaagattatgctcgcattctacgcgcaattagaattgctgctcacttag 426
Query: 737 ggtttagtatttcaagggaaacagctcactctgtaaaaaatctttcatattcaatattaa 796
| || ||| |||| | |||||| ||||| | | | |||||||| || | |||| | ||||
Sbjct: 427 gattcagtgtttctaaggaaactgctcattttatcaaaaatctatcttcttcagtcttaa 486
Query: 797 gacttgataagggtaggttaatgatggaaatgaattatatgctagcttatggatctgctg 856
|||||||||||| |||| | |||||||||| ||||||||||||||||| || | || ||
Sbjct: 487 gacttgataaggataggctcctgatggaaataaattatatgctagcttacggttttggtg 546
Query: 857 aagcttctttgagactattatggagatttggacttctagatatacttctcccctttcagg 916
||||||||||||| |||||||||| |||||||||||| ||||||||||| ||||||||||
Sbjct: 547 aagcttctttgaggctattatggaaatttggacttctcgatatacttcttccctttcagg 606
Query: 917 ctgtttatt 925
||| |||||
Sbjct: 607 ctgcttatt 615
>gnl|LJGI|TC66679 weakly similar to UniRef100_A7QT56 Cluster: Chromosome chr1
scaffold_166, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_166, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (25%)
Length = 803
Score = 234 bits (118), Expect = 1e-60
Identities = 409/506 (80%)
Strand = Plus / Plus
Query: 1030 agcttatgggttggtatccttgcattacacaaaacattgagtgatcaaccaaggaatccc 1089
|||||||||||||| |||||||||||||| |||||||||||||||| ||||||| | |||
Sbjct: 9 agcttatgggttggcatccttgcattacataaaacattgagtgatcgaccaagggacccc 68
Query: 1090 ttggttgttgctgcatttagccttgcagttcataatggtggaaatttgttggaagcagta 1149
||||| |||||| |||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 69 ttggtggttgcttcatttagccttgcagtacataatggtggaaatctgttggaagcagtg 128
Query: 1150 gacatatctaggaggatcaaccaacctcatgatgacagatttcctgaattgttagatcct 1209
||||| | |||| ||||| | | || ||| ||| |||||||||||||| ||||| |||
Sbjct: 129 aacatagcaaggatgatcagcaacccacattatgtgagatttcctgaattattagaccct 188
Query: 1210 tcggatctggaagcagaggctttggcagatgagattttggatcttgcagagtctgttaaa 1269
|| | |||||| ||| |||| ||| |||||||| | |||| ||||||||||| || ||
Sbjct: 189 tcaggtctggatgcaaaggcactggaagatgagactctggagtttgcagagtctattcaa 248
Query: 1270 gagtcactgttacagatgacaactaggcatatggtatctcaagctatggctgactatcct 1329
| | |||| || || ||||| | | || | |||||| | ||| |||||||||||||
Sbjct: 249 gggacactattgcaaatgactgatcagtattttgtatctaaggctttggctgactatccc 308
Query: 1330 caagctcctcattcagatatggttttcatccctttaggaatgtacctaaaaactgtcagt 1389
||||| |||||||| ||| |||| |||| || |||||| | |||| |||||| || |
Sbjct: 309 caagcccctcattctgatctggtaatcattccattaggactataccgaaaaacattccgc 368
Query: 1390 atttttgattgcctgagagcaagggctggtaggaaatttttgtcaaagcaagataggaaa 1449
||||| | || ||| | || |||| || ||||||||||||||||||||| || ||
Sbjct: 369 attttcggatgtgtgaaaaggagtgctgataagaaatttttgtcaaagcaagacagaaat 428
Query: 1450 actgattacgagtccttagcacatggtgacctgcaagaagtacggcacatgttagcaatg 1509
| |||||||||||| || ||||||||| |||| |||||| ||| || | || |||| |
Sbjct: 429 attgattacgagtctttggcacatggtaacctacaagaaacacgacatgtttttgcaagg 488
Query: 1510 gttgtatttgataccatatatccact 1535
||||||||||||||||||| |||||
Sbjct: 489 attgtatttgataccatatacccact 514
>gnl|LJGI|FS327446 weakly similar to UniRef100_Q8VXU8 Cluster: AT5g23690/MQM1_4; n=1;
Arabidopsis thaliana|Rep: AT5g23690/MQM1_4 - Arabidopsis
thaliana (Mouse-ear cress), partial (21%)
Length = 764
Score = 123 bits (62), Expect = 4e-27
Identities = 170/206 (82%)
Strand = Plus / Plus
Query: 253 aagaaaaaggggtatgatgtatatcttgttggaggttgtgtacgggatcttatactaaaa 312
|||||||| || || ||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 338 aagaaaaaaggatacgatgtgtatcttgtaggaggttgtgtacgggatcttattctaaag 397
Query: 313 caaacaccaaaagactttgatattttaacttctgcggatcttaaagaggtcatgagatca 372
||||||| || ||||| || || ||||||| || || || || ||||||||||| |
Sbjct: 398 gaaacaccgaaggacttcaatgttataacttcagctgagctcaagcaggtcatgagaata 457
Query: 373 ttttcatggtgtgagatagttggtaaaaggttcccaatatgtcatgtccatatggatggc 432
||||||||||||||||| ||||||| | | ||| | |||||| | || ||||||||
Sbjct: 458 ttttcatggtgtgagattactggtaaacgttcccctacatgtcacattcacatggatggt 517
Query: 433 actgttgttgaggtttcaagttttaa 458
|| |||||||||||||||||||||||
Sbjct: 518 accgttgttgaggtttcaagttttaa 543