Miyakogusa Predicted Gene
- Lj4g3v2881950.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2881950.2 Non Chatacterized Hit- tr|I1K6T1|I1K6T1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51850 PE,88.75,0,no
description,DNA-binding pseudobarrel domain; seg,NULL; B3 DNA binding
domain,B3 DNA binding domai,CUFF.51836.2
(1461 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75773 similar to UniRef100_Q56YP4 Cluster: ARF1-bindi... 894 0.0
gnl|LJGI|TC66053 homologue to UniRef100_A7PHQ5 Cluster: Chromoso... 739 0.0
gnl|LJGI|TC72914 similar to UniRef100_Q56YP4 Cluster: ARF1-bindi... 686 0.0
gnl|LJGI|BP033179 similar to UniRef100_A7PHQ5 Cluster: Chromosom... 367 e-100
gnl|LJGI|TC82651 similar to UniRef100_A7PHQ5 Cluster: Chromosome... 161 2e-38
>gnl|LJGI|TC75773 similar to UniRef100_Q56YP4 Cluster: ARF1-binding protein; n=1;
Arabidopsis thaliana|Rep: ARF1-binding protein -
Arabidopsis thaliana (Mouse-ear cress), partial (18%)
Length = 587
Score = 894 bits (451), Expect = 0.0
Identities = 536/558 (96%), Gaps = 6/558 (1%)
Strand = Plus / Plus
Query: 463 gtgcattcgttctgtaaaacgctcacagcgtcggataccagtacacacggtgggttttca 522
||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 26 gtgcattcgttctgtttaacgctcacagcgtcggataccagtacagacggtgggttttca 85
Query: 523 gtgctgagacgacatgctgatgaatgcctccctccgctggacatgtcaaaacagccacct 582
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 86 gtgctgagacgacatgctgatgaatgcctccctccgctggacatgtccaaacagccacct 145
Query: 583 acccaggaattggtagccaaggacctccatgggagcgagtggcgattcaggcatatcttt 642
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 acccaggcattggtagccaaggacctccatgggagcgagtggcgattcaggcatatcttt 205
Query: 643 cgcggtcaaccacgtagacacttattgcaaagcggttggagtgtttttgtcagctctaag 702
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 206 ctcggtcaaccacgtagacacttattgctaagcggttggagtgtttttgtcagctctaag 265
Query: 703 aggctagttgctggggatgcatttattttcctaagaggtgagaatggggaacttcgagtg 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aggctagttgctggggatgcatttattttcctaagaggtgagaatggggaacttcgagtg 325
Query: 763 ggtgtcaggcgtgccatgagacagcagggtaatgtttcatcttcagttatctcaagccac 822
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 326 ggtgtcaggcgtgccatgagacagcagggtaatgtttcatcttcagttatctcaagcccc 385
Query: 823 agcatgcatctcggtgtccttgcaactgcttggcatgccaacttgaccgggaccatgttt 882
||| ||||||||||||||||||| | |||||||||||||||||||||||||| |||||||
Sbjct: 386 agcctgcatctcggtgtccttgccagtgcttggcatgccaacttgaccgggagcatgttt 445
Query: 883 actgtttattacaaacctaggaccagt-ccagctg-aatttattgttccttatgatcaat 940
|||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 446 actgtttattactaacctaggaccagtcccagctgcaatttattgttccttatgatcaat 505
Query: 941 acatggagtccctta-aaaataattataccataggtatgcggttcaaaatgaggttcgag 999
||||||||||||||| ||||||||||||||||| |||||||||| ||||||| |||||
Sbjct: 506 acatggagtcccttaccaaataattataccatagctatgcggttc-aaatgag--tcgag 562
Query: 1000 ggtgaagaggctcccgag 1017
||||||||| ||||||||
Sbjct: 563 ggtgaagagactcccgag 580
>gnl|LJGI|TC66053 homologue to UniRef100_A7PHQ5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 1177
Score = 739 bits (373), Expect = 0.0
Identities = 706/817 (86%)
Strand = Plus / Plus
Query: 134 cgagagatgcggaaactgcactttacagggagctatggcatgcttgtgctggtcctctgg 193
||||||| |||||| |||| || ||||||||||||||||||||||||||||||||||| |
Sbjct: 355 cgagagacgcggaagctgcgctgtacagggagctatggcatgcttgtgctggtcctcttg 414
Query: 194 ttactgtgccaagagaaggagagcgcgtcttctattttcctcagggacacattgaacagg 253
| || |||||| | |||||||| || |||||||| || ||||||||||| ||||||||||
Sbjct: 415 tgacggtgccacgggaaggagaacgagtcttctacttccctcagggacatattgaacagg 474
Query: 254 tggaggcatcgacgaatcaggtagcggaactacacatgcctgtttacgatctcccaccca 313
||||||| || ||||||||||| ||||| || ||||| ||||||||||||||| | |
Sbjct: 475 tggaggcttcaacgaatcaggtggcggacgagcatatgccggtttacgatctcccatcta 534
Query: 314 agatcttgtgtcgggtcatcaacgtgatgctcaaggcggagccagacacagatgaggtgt 373
||||| | || ||||||||||||||| ||| ||||||||||| || || ||||||||||
Sbjct: 535 agatcctatgccgggtcatcaacgtgcagctgaaggcggagccggatacggatgaggtgt 594
Query: 374 ttgctcaggtgaccttacttccagaaccaaatcaagatgagaatgcggtggagaaagagg 433
|||||||||||||||||||||| || |||||||||||||||||||| |||||||| |||
Sbjct: 595 ttgctcaggtgaccttacttcctgagccaaatcaagatgagaatgccgtggagaaggagc 654
Query: 434 ctaggctgccgccgccaccacgatttcacgtgcattcgttctgtaaaacgctcacagcgt 493
|| || |||||||| ||||||||||| |||||||| ||||||||||| | || || |
Sbjct: 655 ctccgccaccgccgccgccacgatttcatgtgcattctttctgtaaaaccttgacggcct 714
Query: 494 cggataccagtacacacggtgggttttcagtgctgagacgacatgctgatgaatgcctcc 553
| |||||||| || || ||||||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 715 ccgataccagcacccatggtgggttttccgtgctgagacgacatgctgatgagtgccttc 774
Query: 554 ctccgctggacatgtcaaaacagccacctacccaggaattggtagccaaggacctccatg 613
|||| |||||||||||||| |||||||| ||||||||||||| || ||||| | ||||
Sbjct: 775 ctccactggacatgtcaaagcagccaccaacccaggaattggcggctaaggatttgcatg 834
Query: 614 ggagcgagtggcgattcaggcatatctttcgcggtcaaccacgtagacacttattgcaaa 673
||| || |||||||| || || ||||||||||||||||| |||||||||||| | || |
Sbjct: 835 ggaatgaatggcgatttagacacatctttcgcggtcaaccccgtagacacttacttcaga 894
Query: 674 gcggttggagtgtttttgtcagctctaagaggctagttgctggggatgcatttattttcc 733
| ||||||||||||||||| ||||| || ||||| || |||||||||||||||||||| |
Sbjct: 895 gtggttggagtgtttttgtgagctccaaaaggcttgtcgctggggatgcatttatttttc 954
Query: 734 taagaggtgagaatggggaacttcgagtgggtgtcaggcgtgccatgagacagcagggta 793
||||||||||||||||||||||||| || ||||| ||||| || ||||||||||| || |
Sbjct: 955 taagaggtgagaatggggaacttcgtgttggtgtaaggcgagcaatgagacagcaaggca 1014
Query: 794 atgtttcatcttcagttatctcaagccacagcatgcatctcggtgtccttgcaactgctt 853
||||| || | ||||||||||| ||||||||||||||||| || ||||||||||||||||
Sbjct: 1015 atgttccaccatcagttatctctagccacagcatgcatcttggggtccttgcaactgctt 1074
Query: 854 ggcatgccaacttgaccgggaccatgtttactgtttattacaaacctaggaccagtccag 913
||||||| | |||||| || || || || |||||||||||||| || ||||||||||| |
Sbjct: 1075 ggcatgctatcttgacgggaactatattcactgtttattacaagcccaggaccagtcctg 1134
Query: 914 ctgaatttattgttccttatgatcaatacatggagtc 950
|||| || |||||||| ||||||||||| ||||||||
Sbjct: 1135 ctgagttcattgttccatatgatcaatatatggagtc 1171
>gnl|LJGI|TC72914 similar to UniRef100_Q56YP4 Cluster: ARF1-binding protein; n=1;
Arabidopsis thaliana|Rep: ARF1-binding protein -
Arabidopsis thaliana (Mouse-ear cress), partial (11%)
Length = 586
Score = 686 bits (346), Expect = 0.0
Identities = 380/397 (95%)
Strand = Plus / Plus
Query: 1 atggcgacatcggaggtaacgaacaagggaaattctgtgaacggaatgggtgacaccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 atggcgacatcggaggtaacgaacaagggaaattctgtgaacggaatgggtgacaccaac 249
Query: 61 tnnnnnnnnnnnnnnnnngatggtagtagaaacggtgcaggagagggtcagagtggttca 120
| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tacaacaacaacaacaacgatggtagtagaaacggtgcaggagagggtcagagtggttca 309
Query: 121 tcatcgtcaccgacgagagatgcggaaactgcactttacagggagctatggcatgcttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tcatcgtcaccgacgagagatgcggaaactgcactttacagggagctatggcatgcttgt 369
Query: 181 gctggtcctctggttactgtgccaagagaaggagagcgcgtcttctattttcctcaggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gctggtcctctggttactgtgccaagagaaggagagcgcgtcttctattttcctcaggga 429
Query: 241 cacattgaacaggtggaggcatcgacgaatcaggtagcggaactacacatgcctgtttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cacattgaacaggtggaggcatcgacgaatcaggtagcggaactacacatgcctgtttac 489
Query: 301 gatctcccacccaagatcttgtgtcgggtcatcaacgtgatgctcaaggcggagccagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gatctcccacccaagatcttgtgtcgggtcatcaacgtgatgctcaaggcggagccagac 549
Query: 361 acagatgaggtgtttgctcaggtgaccttacttccag 397
|||||||||||||||||||||||||||||||||||||
Sbjct: 550 acagatgaggtgtttgctcaggtgaccttacttccag 586
>gnl|LJGI|BP033179 similar to UniRef100_A7PHQ5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 528
Score = 367 bits (185), Expect = e-100
Identities = 185/185 (100%)
Strand = Plus / Plus
Query: 1277 ctaaagtaaacgcagaccctttgcccgccagtgggttcccaagggtcttgcaaggtcaag 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaaagtaaacgcagaccctttgcccgccagtgggttcccaagggtcttgcaaggtcaag 60
Query: 1337 aatcatcgaccttgagaggtaattttgctgagagcattgagtctaatactgcagagaagt 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatcatcgaccttgagaggtaattttgctgagagcattgagtctaatactgcagagaagt 120
Query: 1397 ctgttccgtggccacgtgcagcagatgatgaaaagattgacgctgcttctacatcaagaa 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgttccgtggccacgtgcagcagatgatgaaaagattgacgctgcttctacatcaagaa 180
Query: 1457 ggtat 1461
|||||
Sbjct: 181 ggtat 185
>gnl|LJGI|TC82651 similar to UniRef100_A7PHQ5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 757
Score = 161 bits (81), Expect = 2e-38
Identities = 189/225 (84%)
Strand = Plus / Plus
Query: 1237 tcatcccccgattcttcgattcttactcgagaagcatcttctaaagtaaacgcagaccct 1296
||||| || |||||||| |||||||||||||||| || || ||||||| | |||||||
Sbjct: 6 tcatcgccagattcttctgttcttactcgagaagcttcgtcaaaagtaagtgtagaccct 65
Query: 1297 ttgcccgccagtgggttcccaagggtcttgcaaggtcaagaatcatcgaccttgagaggt 1356
|| || || | |||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 66 ttacctgcaaatgggtttccaagggtcttgcaaggtcaagaattctcgaccttgagaggc 125
Query: 1357 aattttgctgagagcattgagtctaatactgcagagaagtctgttccgtggccacgtgca 1416
||| |||| || |||| ||||||| |||| || |||||||||||| | ||||||| ||||
Sbjct: 126 aatattgcagaaagcaatgagtctgatacggctgagaagtctgttgcttggccacctgca 185
Query: 1417 gcagatgatgaaaagattgacgctgcttctacatcaagaaggtat 1461
| |||||||||||| || || | || |||||| ||||| ||||||
Sbjct: 186 gtagatgatgaaaaaatggatgttgtttctacttcaaggaggtat 230