Miyakogusa Predicted Gene
- Lj4g3v2881950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2881950.1 Non Chatacterized Hit- tr|I1K6T1|I1K6T1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51850 PE,75.32,0,CAD &
PB1 domains,NULL; AUX_IAA,AUX/IAA protein;
IAA_ARF,Aux/IAA-ARF-dimerisation; FAMILY NOT NAMED,,CUFF.51836.1
(1383 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP033179 similar to UniRef100_A7PHQ5 Cluster: Chromosom... 1047 0.0
gnl|LJGI|TC69574 280 2e-74
gnl|LJGI|TC68202 similar to UniRef100_A7PHQ5 Cluster: Chromosome... 262 5e-69
gnl|LJGI|TC82651 similar to UniRef100_A7PHQ5 Cluster: Chromosome... 238 8e-62
gnl|LJGI|TC80968 similar to UniRef100_A7QU71 Cluster: Chromosome... 52 9e-06
gnl|LJGI|TC65587 homologue to UniRef100_A7QU71 Cluster: Chromoso... 52 9e-06
>gnl|LJGI|BP033179 similar to UniRef100_A7PHQ5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 528
Score = 1047 bits (528), Expect = 0.0
Identities = 528/528 (100%)
Strand = Plus / Plus
Query: 95 ctaaagtaaacgcagaccctttgcccgccagtgggttcccaagggtcttgcaaggtcaag 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaaagtaaacgcagaccctttgcccgccagtgggttcccaagggtcttgcaaggtcaag 60
Query: 155 aatcatcgaccttgagaggtaattttgctgagagcattgagtctaatactgcagagaagt 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatcatcgaccttgagaggtaattttgctgagagcattgagtctaatactgcagagaagt 120
Query: 215 ctgttccgtggccacgtgcagcagatgatgaaaagattgacgctgcttctacatcaagaa 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgttccgtggccacgtgcagcagatgatgaaaagattgacgctgcttctacatcaagaa 180
Query: 275 ggtatggatcagagagctggatgttaatggcaaggcaagagccaacatattcagatcttc 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtatggatcagagagctggatgttaatggcaaggcaagagccaacatattcagatcttc 240
Query: 335 tttcaggctttggggcccgtgtagatcattcttcccatccatcatttgtcaatcaaactg 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttcaggctttggggcccgtgtagatcattcttcccatccatcatttgtcaatcaaactg 300
Query: 395 gtactgtagctaacactggtaggaaaagtttgatccatcgcgaagggaagcataatgcgc 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtactgtagctaacactggtaggaaaagtttgatccatcgcgaagggaagcataatgcgc 360
Query: 455 ttactccgtggactggaatgccttctagtctatcactcaacatctcggactctaaaacaa 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttactccgtggactggaatgccttctagtctatcactcaacatctcggactctaaaacaa 420
Query: 515 aaggttcgacactaggcagtgatgtagcttatcaagttcaagggaactcgaggtatagtg 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaggttcgacactaggcagtgatgtagcttatcaagttcaagggaactcgaggtatagtg 480
Query: 575 cattcggtgaatatcatgtccttcatggacacaaggttgaacatccac 622
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cattcggtgaatatcatgtccttcatggacacaaggttgaacatccac 528
>gnl|LJGI|TC69574
Length = 673
Score = 280 bits (141), Expect = 2e-74
Identities = 141/141 (100%)
Strand = Plus / Plus
Query: 1243 atctaccctaaggaggagattcagaaaatgagccccggtactttgagttcaaaaaatgaa 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atctaccctaaggaggagattcagaaaatgagccccggtactttgagttcaaaaaatgaa 61
Query: 1303 gagaatcattcagctagtgaaggtgcagatgcacaagaaattaaatgccagccgccacaa 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gagaatcattcagctagtgaaggtgcagatgcacaagaaattaaatgccagccgccacaa 121
Query: 1363 tcagcttcagatgcctgataa 1383
|||||||||||||||||||||
Sbjct: 122 tcagcttcagatgcctgataa 142
>gnl|LJGI|TC68202 similar to UniRef100_A7PHQ5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 1154
Score = 262 bits (132), Expect = 5e-69
Identities = 285/336 (84%)
Strand = Plus / Plus
Query: 1012 tgcactaaagttcacaagaaggggatcgcgcttggtaggtcagtggacctttcaaagttt 1071
|||||||||||||||||||||||||| || |||||||||||||| |||||| | ||||
Sbjct: 296 tgcactaaagttcacaagaaggggattgcacttggtaggtcagtagaccttacgaagtac 355
Query: 1072 aatgactacgatgaattgattgctgagttggatcagctgtttgaatttggaggtgaatta 1131
| | ||| || |||||| ||||||| ||||||||||||||||| ||||| |||||||||
Sbjct: 356 agcggctatgaagaattggttgctgaattggatcagctgtttgactttgggggtgaatta 415
Query: 1132 acttctccacataaggattggcttgttgtctacactgataatgagggggacatgatgctt 1191
| || || | ||||| ||||| ||||||| |||||||||||||| ||||||||||||
Sbjct: 416 atgtcaacaaaaaaggaatggctcattgtctatactgataatgagggtgacatgatgctt 475
Query: 1192 gttggggatgatccgtggcaggagttttgtgccatggtccgcaagatatatatctaccct 1251
|| || |||||||| ||||||||||| ||| | ||||| || || || |||||||||||
Sbjct: 476 gtaggcgatgatccatggcaggagttctgttcaatggttcggaaaatttatatctacccg 535
Query: 1252 aaggaggagattcagaaaatgagccccggtactttgagttcaaaaaatgaagagaatcat 1311
|| |||||||||||||||||||| || ||||| |||||||| ||||||||||||||||
Sbjct: 536 aaagaggagattcagaaaatgagtccaggtaccttgagttcgaaaaatgaagagaatctg 595
Query: 1312 tcagctagtgaaggtgcagatgcacaagaaattaaa 1347
|||||||| ||||| | |||||| ||||| |||||
Sbjct: 596 tcagctagcgaaggcacggatgcaaaagaagttaaa 631
>gnl|LJGI|TC82651 similar to UniRef100_A7PHQ5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 757
Score = 238 bits (120), Expect = 8e-62
Identities = 252/296 (85%)
Strand = Plus / Plus
Query: 55 tcatcccccgattcttcgattcttactcgagaagcatcttctaaagtaaacgcagaccct 114
||||| || |||||||| |||||||||||||||| || || ||||||| | |||||||
Sbjct: 6 tcatcgccagattcttctgttcttactcgagaagcttcgtcaaaagtaagtgtagaccct 65
Query: 115 ttgcccgccagtgggttcccaagggtcttgcaaggtcaagaatcatcgaccttgagaggt 174
|| || || | |||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 66 ttacctgcaaatgggtttccaagggtcttgcaaggtcaagaattctcgaccttgagaggc 125
Query: 175 aattttgctgagagcattgagtctaatactgcagagaagtctgttccgtggccacgtgca 234
||| |||| || |||| ||||||| |||| || |||||||||||| | ||||||| ||||
Sbjct: 126 aatattgcagaaagcaatgagtctgatacggctgagaagtctgttgcttggccacctgca 185
Query: 235 gcagatgatgaaaagattgacgctgcttctacatcaagaaggtatggatcagagagctgg 294
| |||||||||||| || || | || |||||| ||||| |||||||||||||||||||||
Sbjct: 186 gtagatgatgaaaaaatggatgttgtttctacttcaaggaggtatggatcagagagctgg 245
Query: 295 atgttaatggcaaggcaagagccaacatattcagatcttctttcaggctttggggc 350
|||| ||||| ||| | ||| | || |||||||||||||||||||||||||||||
Sbjct: 246 atgtcaatggggaggaacgaggctacgtattcagatcttctttcaggctttggggc 301
>gnl|LJGI|TC80968 similar to UniRef100_A7QU71 Cluster: Chromosome chr2 scaffold_176,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_176, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 1110
Score = 52.0 bits (26), Expect = 9e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 1157 ttgtctacactgataatgagggggacatgatgcttgttggggatgatccgtggc 1210
|||||| ||||||| |||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 750 ttgtctccactgatgatgaaggggatatgatgcttgtgggagatgatccatggc 803
>gnl|LJGI|TC65587 homologue to UniRef100_A7QU71 Cluster: Chromosome chr2 scaffold_176,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_176, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 824
Score = 52.0 bits (26), Expect = 9e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 1157 ttgtctacactgataatgagggggacatgatgcttgttggggatgatccgtggc 1210
|||||| ||||||| |||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 18 ttgtcttcactgatgatgaaggggatatgatgcttgtgggagatgatccatggc 71