Miyakogusa Predicted Gene

Lj4g3v2871910.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2871910.1 Non Chatacterized Hit- tr|K4AWJ2|K4AWJ2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.5,6e-16,MYB_LIKE,Myb-like domain; Myb_DNA-bind_4,NULL;
seg,NULL,gene.g57613.t1.1
         (1068 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58651 similar to UniRef100_A7QT73 Cluster: Chromosome...    58   1e-07

>gnl|LJGI|TC58651 similar to UniRef100_A7QT73 Cluster: Chromosome chr1 scaffold_166,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_166, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (60%)
          Length = 1526

 Score = 58.0 bits (29), Expect = 1e-07
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 415 aaggaggagacggagtcgttttggatcatgaggaatgatctgaggaaggagaagaag 471
           ||||| || ||||||||||||||| | |||||||||||| |||||| ||||| ||||
Sbjct: 552 aaggatgaaacggagtcgttttggctgatgaggaatgatttgaggagggagaggaag 608