Miyakogusa Predicted Gene

Lj4g3v2859520.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2859520.1 tr|G7LGH2|G7LGH2_MEDTR Myb-like transcription
factor OS=Medicago truncatula GN=MTR_8g095390 PE=4
SV=,51.95,0,HTH_MYB,Myb domain; SANT  SWI3, ADA2, N-CoR and TFIIIB''
DNA-bin,SANT/Myb domain; SUBFAMILY NOT NAME,CUFF.51780.1
         (858 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP036039                                                     422   e-117
gnl|LJGI|TC62535 similar to UniRef100_A7Q8B3 Cluster: Chromosome...    72   6e-12
gnl|LJGI|TC68813 similar to UniRef100_Q0PJL6 Cluster: MYB transc...    52   6e-06

>gnl|LJGI|BP036039 
          Length = 436

 Score =  422 bits (213), Expect = e-117
 Identities = 215/216 (99%)
 Strand = Plus / Minus

                                                                       
Query: 643 ggaaaggctgctgactcaggctcgaatagaagcagtgcggtctctgcatatcaggaagct 702
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ggaaaggctgctgactcaggctcgaatagaagcagtgcggtctctgcatatcaggaagct 377

                                                                       
Query: 703 tataatcctgaaatcaacttggaactttcattggcaccaccaatgaaccctcctcctcct 762
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 376 tataatcctgaaatcaacttggaactttcattggcaccaccnatgaaccctcctcctcct 317

                                                                       
Query: 763 cagaatcagaatgtgatgccaccaccacaacaggttttagggttccaaaggggtgctgct 822
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cagaatcagaatgtgatgccaccaccacaacaggttttagggttccaaaggggtgctgct 257

                                               
Query: 823 cctggtggatttatgagattttatgggctgtgaaga 858
           ||||||||||||||||||||||||||||||||||||
Sbjct: 256 cctggtggatttatgagattttatgggctgtgaaga 221


>gnl|LJGI|TC62535 similar to UniRef100_A7Q8B3 Cluster: Chromosome chr14 scaffold_63,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_63, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (65%)
          Length = 1350

 Score = 71.9 bits (36), Expect = 6e-12
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 284 atctacctgggagaactgataatgagatcaagaaccactggaacaccc 331
           |||| ||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 435 atctccctggaagaactgataatgagatcaagaaccactggaataccc 482


>gnl|LJGI|TC68813 similar to UniRef100_Q0PJL6 Cluster: MYB transcription factor
           MYB56; n=1; Glycine max|Rep: MYB transcription factor
           MYB56 - Glycine max (Soybean), partial (23%)
          Length = 849

 Score = 52.0 bits (26), Expect = 6e-06
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 286 ctacctgggagaactgataatgagatcaagaaccactggaacacccgcatcaag 339
           ||||| || ||||| ||||| |||||||||||| |||||||||| | |||||||
Sbjct: 3   ctaccgggaagaaccgataacgagatcaagaactactggaacacacacatcaag 56