Miyakogusa Predicted Gene
- Lj4g3v2825680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2825680.1 tr|G7LEX1|G7LEX1_MEDTR DNA excision repair
protein ERCC-6-like protein OS=Medicago truncatula
GN=MTR,66.26,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2,
ATP-binding domain; HELICASE_CTER,Helicase, C-termina,CUFF.51731.1
(3216 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS358209 weakly similar to UniRef100_A7QST1 Cluster: Ch... 797 0.0
gnl|LJGI|FS331971 similar to UniRef100_P87105 Cluster: Subtilisi... 464 e-129
>gnl|LJGI|FS358209 weakly similar to UniRef100_A7QST1 Cluster: Chromosome chr4
scaffold_162, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_162, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 661
Score = 797 bits (402), Expect = 0.0
Identities = 402/402 (100%)
Strand = Plus / Minus
Query: 2815 gctttcaaagcccatatagagttcctgaaaagtctcggcatagctggtgttagtcaccac 2874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gctttcaaagcccatatagagttcctgaaaagtctcggcatagctggtgttagtcaccac 602
Query: 2875 agtttgctgttttccaagacagaaccagttcaagctgctccagaggaggatgaagtaaca 2934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agtttgctgttttccaagacagaaccagttcaagctgctccagaggaggatgaagtaaca 542
Query: 2935 aggaatcataggcctccctatattggatcttcaaagccatcttcgcatgatcttgttgtt 2994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aggaatcataggcctccctatattggatcttcaaagccatcttcgcatgatcttgttgtt 482
Query: 2995 gatggagctgagtttgcgtttaatccaaaggatgttaacttaagcaaaaaaggttcttct 3054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatggagctgagtttgcgtttaatccaaaggatgttaacttaagcaaaaaaggttcttct 422
Query: 3055 ccaagcagtgctggtaaattgtcggagtcagaaatcaaggatcaaattaaaaggctctct 3114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccaagcagtgctggtaaattgtcggagtcagaaatcaaggatcaaattaaaaggctctct 362
Query: 3115 ctcacactttcaaatacggcaatggtttctaaattacctgacaagggggagaaactgcat 3174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctcacactttcaaatacggcaatggtttctaaattacctgacaagggggagaaactgcat 302
Query: 3175 aaacggatggcggagctgaatgtaatgctcactaaactgaag 3216
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaacggatggcggagctgaatgtaatgctcactaaactgaag 260
>gnl|LJGI|FS331971 similar to UniRef100_P87105 Cluster: Subtilisin-like protease 3; n=1;
Pneumocystis carinii|Rep: Subtilisin-like protease 3 -
Pneumocystis carinii, partial (3%)
Length = 252
Score = 464 bits (234), Expect = e-129
Identities = 237/238 (99%)
Strand = Plus / Plus
Query: 891 ggagaggaagccggtgcagaagcctgttgagggtttagttggaaagaaagaagctttcga 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ggagaggaagccggtgcagaagcctgttgagggtttagttggaaagaaagaagctttcga 62
Query: 951 agatgagggtttggagtttgggagtgcggggtcttcattttctcaacagcaggataatga 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 agatgagggtttggagtttgggagtgcggggtcttcattttctcaacagcaggataatga 122
Query: 1011 gcttgatggtggtagcggccgtggtgggggtggtttggaggatgattcagatgattctgt 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gcttgatggtggtagcggccgtggtgggggtggtttggaggatgattcagatgattctgt 182
Query: 1071 tcaagagttggatcattttgaggctgttgatgatggttctataactttgattggccca 1128
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 183 tcaagagttggatcattttgaggctgtagatgatggttctataactttgattggccca 240
Score = 54.0 bits (27), Expect = 6e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 813 ggagaggaagccggaaaggaagcctgttgagggtttagttgga 855
|||||||||||||| |||||||||||||||||||||||||
Sbjct: 3 ggagaggaagccggtgcagaagcctgttgagggtttagttgga 45