Miyakogusa Predicted Gene
- Lj4g3v2820140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2820140.1 tr|I1K4K8|I1K4K8_SOYBN Acyl-coenzyme A oxidase
OS=Glycine max GN=Gma.49906 PE=3 SV=1,89.36,0,Acyl-CoA dehydrogenase
C-terminal domain-like,Acyl-CoA dehydrogenase/oxidase C-terminal;
Acyl-CoA de,CUFF.51710.1
(2076 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78232 similar to UniRef100_A7R5F8 Cluster: Chromosome... 1150 0.0
gnl|LJGI|TC75020 similar to UniRef100_O65201 Cluster: Acyl-coenz... 977 0.0
gnl|LJGI|BP066089 similar to UniRef100_A7R5F8 Cluster: Chromosom... 117 3e-25
>gnl|LJGI|TC78232 similar to UniRef100_A7R5F8 Cluster: Chromosome undetermined
scaffold_957, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_957, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(28%)
Length = 592
Score = 1150 bits (580), Expect = 0.0
Identities = 582/583 (99%)
Strand = Plus / Plus
Query: 579 gcagggccttcaaacggttgccacttttgatccaatcacagatgaatttgtcattgatac 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 gcagggccttcaaacggttgccacttttgatccaatcacagatgaatttgtcattgatac 69
Query: 639 accaaatgatggtgccatcaaatggtggattggcaatgccgcggtgcatggcaagtttgc 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 accaaatgatggtgccatcaaatggtggattggcaatgccgcggtgcatggcaagtttgc 129
Query: 699 cactgttttcgctaggttgaggttacccaattatgatgcaaaaggagtttctgatatggg 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cactgttttcgctaggttgaggttacccaattatgatgcaaaaggagtttctgatatggg 189
Query: 759 tgtccatgctttcatagttccaatcagggatatgaagacccataaaccacttcctggaat 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tgtccatgctttcatagttccaatcagggatatgaagacccataaaccacttcctggaat 249
Query: 819 tgagatacatgattgtggacataaagttggcctcaatggcgtggataatggagctttgag 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tgagatacatgattgtggacataaagttggcctcaatggcgtggataatggagctttgag 309
Query: 879 attccgctctgtgagaattcctcgagacaatcttctgaaccgttttggagatgtctctcg 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 attccgctctgtgagaattcctcgagacaatcttctgaaccgttttggagatgtctctcg 369
Query: 939 tgatggaaagtacacaagtagtcttcctacggtgaataagcggtttgctgcaactctagg 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tgatggaaagtacacaagtagtcttcctacggtgaataagcggtttgctgcaactctagg 429
Query: 999 ggaacttgttggtggtagggtaggccttgcatattcttcagttagtgtcctaaaggttgc 1058
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 430 ggaacttgttggtggtagggtaggccttgcatattcttcagttagtgtcctanaggttgc 489
Query: 1059 ttctacaattgccatccgatattctctactacgtcagcaatttggacctccaaaccaacc 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttctacaattgccatccgatattctctactacgtcagcaatttggacctccaaaccaacc 549
Query: 1119 tgaagtcagtatccttgactaccagtctcaacagcataagctt 1161
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tgaagtcagtatccttgactaccagtctcaacagcataagctt 592
>gnl|LJGI|TC75020 similar to UniRef100_O65201 Cluster: Acyl-coenzyme A oxidase 2,
peroxisomal precursor; n=1; Arabidopsis thaliana|Rep:
Acyl-coenzyme A oxidase 2, peroxisomal precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (17%)
Length = 614
Score = 977 bits (493), Expect = 0.0
Identities = 493/493 (100%)
Strand = Plus / Plus
Query: 1 atgatgatgaatccaaaatccaaatccaaatccgatttgtgggaagcagagaatcgaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atgatgatgaatccaaaatccaaatccaaatccgatttgtgggaagcagagaatcgaatc 181
Query: 61 cagaggctatcccatcacctaaaccccatcatccctcgcggtcgcgtttacgacgacgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cagaggctatcccatcacctaaaccccatcatccctcgcggtcgcgtttacgacgacgaa 241
Query: 121 tcgaaccacttggagatggtagcgtgcgctcgtgtgaagaaactgagcgtggatgcggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tcgaaccacttggagatggtagcgtgcgctcgtgtgaagaaactgagcgtggatgcggat 301
Query: 181 tctctgtcaaattacatgagggggaaacacagagacattcaggagaaggtttttgattac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tctctgtcaaattacatgagggggaaacacagagacattcaggagaaggtttttgattac 361
Query: 241 ttcaatgccaatccgaacctccaaacccccattgaaatctccaaggatcaacatcgccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttcaatgccaatccgaacctccaaacccccattgaaatctccaaggatcaacatcgccaa 421
Query: 301 ctctgcatgaaacagctcgtggggcttgttagagaagctggggtgagacccctccgttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ctctgcatgaaacagctcgtggggcttgttagagaagctggggtgagacccctccgttac 481
Query: 361 gttaccgatgatccggagaagtacttcgccattgtggaagctgttggtagcgtcgacatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gttaccgatgatccggagaagtacttcgccattgtggaagctgttggtagcgtcgacatg 541
Query: 421 tcactcgggatcaagatgggtgtgcaatacagtctgtggggtggttctgttctcaatttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tcactcgggatcaagatgggtgtgcaatacagtctgtggggtggttctgttctcaatttg 601
Query: 481 ggaacccagaagc 493
|||||||||||||
Sbjct: 602 ggaacccagaagc 614
>gnl|LJGI|BP066089 similar to UniRef100_A7R5F8 Cluster: Chromosome undetermined
scaffold_957, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_957, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(4%)
Length = 406
Score = 117 bits (59), Expect = 3e-25
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 1998 tcccgatcatgttacacgggctcctattgccatgcagtcagaagcttacacgcagtacac 2057
||||||||||||||| ||||| ||||||||||||||| ||||||| ||||||||||||||
Sbjct: 406 tcccgatcatgttacgcgggcgcctattgccatgcagacagaagcgtacacgcagtacac 347
Query: 2058 acaacatgtgggattctaa 2076
|| ||||||||||||||||
Sbjct: 346 acgacatgtgggattctaa 328