Miyakogusa Predicted Gene
- Lj4g3v2804810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2804810.1 Non Chatacterized Hit- tr|I1K4M6|I1K4M6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8711 PE=,91.9,0,no
description,Armadillo-like helical; ARMADILLO/BETA-CATENIN REPEAT
FAMILY PROTEIN / U-BOX DOMAIN-C,CUFF.51694.1
(2757 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV410152 homologue to UniRef100_A7PL51 Cluster: Chromos... 511 e-144
gnl|LJGI|TC57304 homologue to UniRef100_Q6NPD6 Cluster: At2g2212... 410 e-113
gnl|LJGI|AV413555 homologue to UniRef100_A7PL51 Cluster: Chromos... 345 9e-94
gnl|LJGI|AV410430 homologue to UniRef100_Q6NPD6 Cluster: At2g221... 149 1e-34
>gnl|LJGI|AV410152 homologue to UniRef100_A7PL51 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 399
Score = 511 bits (258), Expect = e-144
Identities = 360/394 (91%)
Strand = Plus / Plus
Query: 1829 ttcctcatgctttatgggagtctgctgcctctgttttgtcaagcattttgcaattcagct 1888
||||||||||| ||||||||||||||||||| |||||| ||| ||| ||||||| || |
Sbjct: 6 ttcctcatgctctatgggagtctgctgcctcggttttggcaactattctgcaatttagtt 65
Query: 1889 ctgaattctacttggaagttcctatagctgtgttggtaaggttgcttcgatctggctcgg 1948
||||||||||||||||||||||| | ||||| ||||||||||||||||| |||||||| |
Sbjct: 66 ctgaattctacttggaagttcctgttgctgttttggtaaggttgcttcggtctggctcag 125
Query: 1949 agagcacagttattggtgcattaaatgctcttctggtgttggaaagtgatgatcgattta 2008
||||||||||||||||| |||||||||||||||| ||||| |||||||||||| || ||
Sbjct: 126 agagcacagttattggtacattaaatgctcttcttgtgttagaaagtgatgatggaagta 185
Query: 2009 gtgcagaagcgatggctgaaagtggtgctgtagaggctctcttggagctgctaagatctc 2068
|||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 186 gtgcagaagcaatggctgaaagtggtgccatagaggctctcttggagcttctaagatctc 245
Query: 2069 atcagtgcgaggaaactgcggcaagactcttagaagtattgctgaacaatgtaaagatcc 2128
||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atcagtgtgaggatactgctgcaagactcttagaagtattgctgaacaatgtaaagatca 305
Query: 2129 gagaaacaaaagttactaaatcagctatcttaccattatcccagtacctcttggacccac 2188
||||||||||||| ||| | || || ||||||||||||||||||||||||||||||||||
Sbjct: 306 gagaaacaaaagtaactgactcggccatcttaccattatcccagtacctcttggacccac 365
Query: 2189 aaacccaagcacagcaagcaaggttattggcaac 2222
|||||||||||||||||||||| ||||| |||||
Sbjct: 366 aaacccaagcacagcaagcaagattattagcaac 399
>gnl|LJGI|TC57304 homologue to UniRef100_Q6NPD6 Cluster: At2g22125; n=2; Arabidopsis
thaliana|Rep: At2g22125 - Arabidopsis thaliana (Mouse-ear
cress), partial (83%)
Length = 1104
Score = 410 bits (207), Expect = e-113
Identities = 213/215 (99%)
Strand = Plus / Plus
Query: 2492 tcttctcaaataatactattcaagagtatgcttctagcgaaacagtcagagcgatcactg 2551
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2 tcttctcaaataatactattcaagagtatgcttctagcggaacagtcagagcgatcactg 61
Query: 2552 ccactattgaaaaagatttatgggccagtggaactgtgaatgaggagtatctgaaagcct 2611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ccactattgaaaaagatttatgggccagtggaactgtgaatgaggagtatctgaaagcct 121
Query: 2612 tgaattctctatttagcaactttccacggctgagagcaactgaaccagcaactcttagca 2671
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 122 tgaattctctatttagcaactttccacggctgagagtaactgaaccagcaactcttagca 181
Query: 2672 ttccccacctggttacatccttaaagacaggttca 2706
|||||||||||||||||||||||||||||||||||
Sbjct: 182 ttccccacctggttacatccttaaagacaggttca 216
Score = 87.7 bits (44), Expect = 3e-16
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 2714 ctgtttctgctcagacaagcttggtcagcatgcccagctgaagt 2757
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ctgtttctgctcagacaagcttggtcagcatgcccagctgaagt 290
>gnl|LJGI|AV413555 homologue to UniRef100_A7PL51 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 315
Score = 345 bits (174), Expect = 9e-94
Identities = 273/306 (89%)
Strand = Plus / Plus
Query: 2271 tgatgcagtttcagcttgccgtgcattagtaaatgtgcttgaagacaacccgacagaaga 2330
||||||||||| |||||| ||||| ||||| ||||| ||||| ||| | || || |||||
Sbjct: 9 tgatgcagttttagcttgtcgtgctttagtgaatgttcttgaggaccaaccaactgaaga 68
Query: 2331 aatgaaagttgtagccatatgtgctttgcaaaaccttgtgatgtacagtcgatcaaataa 2390
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 69 aatgaaagttgtagccatatgtgctctgcaaaaccttgtgatgtacagccgatcaaataa 128
Query: 2391 aagagcagttgcagaggctggtggtgttcaggtcgtattggatctgataggttcaagtga 2450
||||||||||||||||| ||||||||||| | ||| | ||||||||||||||||||||
Sbjct: 129 gagagcagttgcagaggccggtggtgttcaaattgtacttgatctgataggttcaagtga 188
Query: 2451 accagaaacatctgttcaagctgcaatgtttattaaacttctcttctcaaataatactat 2510
|| |||||||||||||| ||||||||||||||||| |||||||| |||||| |||||||
Sbjct: 189 tcctgaaacatctgttcaggctgcaatgtttattaagcttctcttttcaaatcatactat 248
Query: 2511 tcaagagtatgcttctagcgaaacagtcagagcgatcactgccactattgaaaaagattt 2570
|||||||| ||||||||||||||||||||||| || ||||| | |||||||| |||||
Sbjct: 249 acaagagtacgcttctagcgaaacagtcagagcaataactgctgcaattgaaaaggattt 308
Query: 2571 atgggc 2576
||||||
Sbjct: 309 atgggc 314
>gnl|LJGI|AV410430 homologue to UniRef100_Q6NPD6 Cluster: At2g22125; n=2; Arabidopsis
thaliana|Rep: At2g22125 - Arabidopsis thaliana (Mouse-ear
cress), partial (40%)
Length = 374
Score = 149 bits (75), Expect = 1e-34
Identities = 114/127 (89%)
Strand = Plus / Plus
Query: 2580 tggaactgtgaatgaggagtatctgaaagccttgaattctctatttagcaactttccacg 2639
|||||||||||| || |||||||| |||||||| ||||||||||||||||| || || ||
Sbjct: 2 tggaactgtgaacgatgagtatcttaaagccttaaattctctatttagcaatttcccccg 61
Query: 2640 gctgagagcaactgaaccagcaactcttagcattccccacctggttacatccttaaagac 2699
||| |||||||||||||||||||| ||||||||||| || |||||||||| ||||||||
Sbjct: 62 gctcagagcaactgaaccagcaacacttagcattccacatttggttacatctttaaagac 121
Query: 2700 aggttca 2706
|||||||
Sbjct: 122 aggttca 128
Score = 54.0 bits (27), Expect = 5e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 2719 tctgctcagacaagcttggtcagcatgcccagctgaagt 2757
||||||||| |||||||||||||||||||| || |||||
Sbjct: 164 tctgctcaggcaagcttggtcagcatgcccggcagaagt 202