Miyakogusa Predicted Gene

Lj4g3v2803790.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2803790.1 Non Chatacterized Hit- tr|D8RYS8|D8RYS8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,32.03,0.000000000001,seg,NULL; Mitofilin,Mitochondrial inner
membrane protein Mitofilin; coiled-coil,NULL,CUFF.51680.1
         (1686 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW595481 similar to UniRef100_A7PL49 Cluster: Chromosom...   343   2e-93
gnl|LJGI|TC81034 similar to UniRef100_A7QNK8 Cluster: Chromosome...   161   2e-38
gnl|LJGI|TC76819 similar to UniRef100_Q2V3F7 Cluster: Uncharacte...   161   2e-38
gnl|LJGI|TC75166 similar to UniRef100_A7QNK8 Cluster: Chromosome...   153   4e-36
gnl|LJGI|BW597506 similar to UniRef100_A7PL49 Cluster: Chromosom...    54   3e-06

>gnl|LJGI|BW595481 similar to UniRef100_A7PL49 Cluster: Chromosome chr7 scaffold_20,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_20, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (37%)
          Length = 474

 Score =  343 bits (173), Expect = 2e-93
 Identities = 176/177 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1426 ttgaaattgcaaaatgttcaggaattggccaaggcagagttaaatgcagccttagcaaat 1485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ttgaaattgcaaaatgttcaggaattggccaaggcagagttaaatgcagccttagcaaat 60

                                                                        
Query: 1486 gagaaggcagcccaaattgaaaaaatggctgaagcaaatattaatattaatgccttgtgc 1545
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gagaaggcagcccaaattgaaaaaatggctgaagcaaatattaatattaatgccttgtgc 120

                                                                     
Query: 1546 atggcattttatgctcgatctgaagaagctcgacaaagtcatgctgcacaaattttt 1602
            |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 121  atggcattttatgctcgatctgaagaagctcgacaaagtcatgctgcacaaagtttt 177


>gnl|LJGI|TC81034 similar to UniRef100_A7QNK8 Cluster: Chromosome chr2 scaffold_132,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr2 scaffold_132, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (20%)
          Length = 800

 Score =  161 bits (81), Expect = 2e-38
 Identities = 97/101 (96%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1409 aggaaactgaagcagaattgaaattgcaaaa-tgttcaggaattggccaaggcagagtta 1467
            |||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||
Sbjct: 450  aggaaactgaagcagaattgaaattgaaaaaatgttcaggaattggccaaggtagagtta 509

                                                     
Query: 1468 aatgcagccttagcaaatgagaaggcagcccaaattgaaaa 1508
            ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 510  aatgcagccttagcaaatgtgaaggcagcccaaattgaaaa 550


>gnl|LJGI|TC76819 similar to UniRef100_Q2V3F7 Cluster: Uncharacterized protein
            At4g23470.3; n=1; Arabidopsis thaliana|Rep:
            Uncharacterized protein At4g23470.3 - Arabidopsis
            thaliana (Mouse-ear cress), partial (19%)
          Length = 486

 Score =  161 bits (81), Expect = 2e-38
 Identities = 97/101 (96%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1409 aggaaactgaagcagaattgaaattgcaaaa-tgttcaggaattggccaaggcagagtta 1467
            |||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||
Sbjct: 141  aggaaactgaagcagaattgaaattgaaaaaatgttcaggaattggccaaggtagagtta 200

                                                     
Query: 1468 aatgcagccttagcaaatgagaaggcagcccaaattgaaaa 1508
            ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201  aatgcagccttagcaaatgtgaaggcagcccaaattgaaaa 241


>gnl|LJGI|TC75166 similar to UniRef100_A7QNK8 Cluster: Chromosome chr2 scaffold_132,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr2 scaffold_132, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (19%)
          Length = 545

 Score =  153 bits (77), Expect = 4e-36
 Identities = 96/101 (95%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1409 aggaaactgaagcagaattgaaattgcaaaa-tgttcaggaattggccaaggcagagtta 1467
            |||||||||||||||||||||||||| |||| ||||| |||||||||||||| |||||||
Sbjct: 268  aggaaactgaagcagaattgaaattgaaaaaatgttcgggaattggccaaggtagagtta 327

                                                     
Query: 1468 aatgcagccttagcaaatgagaaggcagcccaaattgaaaa 1508
            ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 328  aatgcagccttagcaaatgtgaaggcagcccaaattgaaaa 368


>gnl|LJGI|BW597506 similar to UniRef100_A7PL49 Cluster: Chromosome chr7 scaffold_20,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_20, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (27%)
          Length = 506

 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 1564 tctgaagaagctcgacaaagtcatgctgcacaaattttt 1602
            ||||||||| ||||||||| |||||||||||||| ||||
Sbjct: 183  tctgaagaaactcgacaaaatcatgctgcacaaagtttt 221