Miyakogusa Predicted Gene
- Lj4g3v2802780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2802780.1 Non Chatacterized Hit- tr|H9KDQ4|H9KDQ4_APIME
Uncharacterized protein OS=Apis mellifera
GN=LOC100578,29.57,4e-18,Putative DNA-binding (bihelical) motif
predi,DNA-binding SAP; APOPTOTIC CHROMATIN CONDENSATION
INDUC,CUFF.51676.1
(2103 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62237 similar to UniRef100_A7PL47 Cluster: Chromosome... 1352 0.0
gnl|LJGI|AV407701 weakly similar to UniRef100_Q7XIG8 Cluster: Ac... 765 0.0
gnl|LJGI|AU252033 similar to UniRef100_A7PL47 Cluster: Chromosom... 648 0.0
gnl|LJGI|FS324580 similar to UniRef100_A7PL47 Cluster: Chromosom... 502 e-141
gnl|LJGI|TC82512 similar to UniRef100_Q10KI0 Cluster: SAP domain... 295 6e-79
gnl|LJGI|TC62733 similar to UniRef100_A7PL47 Cluster: Chromosome... 293 2e-78
gnl|LJGI|TC70716 similar to UniRef100_A7PL47 Cluster: Chromosome... 131 2e-29
gnl|LJGI|TC80683 similar to UniRef100_A7PL47 Cluster: Chromosome... 72 2e-11
gnl|LJGI|CB827913 similar to UniRef100_UPI0000ECAEC5 Cluster: Al... 70 6e-11
>gnl|LJGI|TC62237 similar to UniRef100_A7PL47 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 925
Score = 1352 bits (682), Expect = 0.0
Identities = 699/707 (98%)
Strand = Plus / Plus
Query: 1397 ctacaagaaaggatgagccaattgcttcaaaaggcaagttctctaggttggattcctcaa 1456
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctacaagaaaggatgagtcaattgcttcaaaaggcaagttctctaggttggattcctcaa 61
Query: 1457 caattgatgatgcacccaaagaacgcattgttccaccatcacaaagggccccgacatgtt 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 caattgatgatgcacccaaagaacgcattgttccaccatcacaaagggccccgacatgtt 121
Query: 1517 ccctcaggattgatcgtttcctccgtccatttaccttaaaagcagtacaagagcttcttg 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ccctcaggattgatcgtttcctccgtccatttaccttaaaagcagtacaagagcttcttg 181
Query: 1577 gtaaaactggaaatgtcatcagtttctggatggaccaaataaagacccattgctatgtaa 1636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtaaaactggaaatgtcatcagtttctggatggaccaaataaagacccattgctatgtaa 241
Query: 1637 cttactcatctgtcgaggaagccattgaaacacgaaatgctgtgtataatctgcaatggc 1696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cttactcatctgtcgaggaagccattgaaacacgaaatgctgtgtataatctgcaatggc 301
Query: 1697 ctcgaaatggcggacaccttttagttgctgagtatgtggatcctcaagaagtgaaaatga 1756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctcgaaatggcggacaccttttagttgctgagtatgtggatcctcaagaagtgaaaatga 361
Query: 1757 agctagaacctactcctgctgtggttatccctgtcagcaacgatttaacagctcatcctg 1816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agctagaacctactcctgctgtggttatccctgtcagcaacgatttaacagctcatcctg 421
Query: 1817 caacaccttcctctaagccagagcctnnnnnnnttcagcacagtgaagagccttcgtttc 1876
|||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 422 caacaccttcctctaagccagagcctcccccccttcagcacagtgaagagccttcgtttc 481
Query: 1877 cagctatgctcctccctcctccaccaccgctttcaaagctaccaccagcagcaagagaac 1936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cagctatgctcctccctcctccaccaccgctttcaaagctaccaccagcagcaagagaac 541
Query: 1937 gtcttcccccgcctccacccccagagaaagttgaccgacctattgtcacacttgatgatc 1996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gtcttcccccgcctccacccccagagaaagttgaccgacctattgtcacacttgatgatc 601
Query: 1997 tctttcgtaaaaccagtgcagctcctcgaatttactatttacctttatctgaagagcaag 2056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tctttcgtaaaaccagtgcagctcctcgaatttactatttacctttatctgaagagcaag 661
Query: 2057 ttgcagcaaaacttgcagtacagggaaagagcatcattaagcagtag 2103
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ttgcagcaaaacttgcagtacagggaaagagcatcattaagcagtag 708
>gnl|LJGI|AV407701 weakly similar to UniRef100_Q7XIG8 Cluster: AcinusL protein-like;
n=1; Oryza sativa Japonica Group|Rep: AcinusL
protein-like - Oryza sativa subsp. japonica (Rice),
partial (6%)
Length = 398
Score = 765 bits (386), Expect = 0.0
Identities = 395/398 (99%)
Strand = Plus / Plus
Query: 889 tcatcaaataatgatatcccaggtcatgatgtatcacattcgatggatgttggagagcca 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcatcaaataatgatatcccaggtcatgatgtatcacattcgatggatgttggagagcca 60
Query: 949 cataagaaaaagacacctgttgaggaaaatagctataataataaaagtccaaacctgaac 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cataagaaaaagacacctgttgaggaaaatagctataataataaaagtccaaacctgaac 120
Query: 1009 aatcccaatagcagtgaagttgttgattatccagaaaagttaaacttggatagaagttct 1068
|| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 121 aagcccaatagcagtgaagatgttgagtatccagaaaagttaaacttggatagaagttct 180
Query: 1069 ggtgatgattccatggaagaggatttgcctgagagcaagcaatatgattctaagtttaat 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtgatgattccatggaagaggatttgcctgagagcaagcaatatgattctaagtttaat 240
Query: 1129 gttgatgaacttagagacaagggggagagtgttgaagtgtctatattgaaggaagaaggt 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttgatgaacttagagacaagggggagagtgttgaagtgtctatattgaaggaagaaggt 300
Query: 1189 cgtactgcagttgtcggagatggtctatctccagacagaggtgatactcaccatgataat 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgtactgcagttgtcggagatggtctatctccagacagaggtgatactcaccatgataat 360
Query: 1249 gaaattcctcctgtttcccttgttgagaaacgaaagtc 1286
||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaaattcctcctgtttcccttgttgagaaacgaaagtc 398
>gnl|LJGI|AU252033 similar to UniRef100_A7PL47 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 335
Score = 648 bits (327), Expect = 0.0
Identities = 327/327 (100%)
Strand = Plus / Plus
Query: 601 gttacaatgcaggagaatgaggagtccaaggctgggatggatgaagactcaaagcctcag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gttacaatgcaggagaatgaggagtccaaggctgggatggatgaagactcaaagcctcag 68
Query: 661 ctggattgtgacctaaagcccttgtgcgaggatctcacacccaactcttctcttcctgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ctggattgtgacctaaagcccttgtgcgaggatctcacacccaactcttctcttcctgaa 128
Query: 721 aatcaggtatctgaggtcaaccctagtttagggtctcacctaaaatctgattctatttct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 aatcaggtatctgaggtcaaccctagtttagggtctcacctaaaatctgattctatttct 188
Query: 781 agtaattctgtgtcaattaatcaaaagaatgaactaaaggatactataattgctgataat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 agtaattctgtgtcaattaatcaaaagaatgaactaaaggatactataattgctgataat 248
Query: 841 gttaaattagaggaagatattgttaggccagagatggtggaagaaccatcatcaaataat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gttaaattagaggaagatattgttaggccagagatggtggaagaaccatcatcaaataat 308
Query: 901 gatatcccaggtcatgatgtatcacat 927
|||||||||||||||||||||||||||
Sbjct: 309 gatatcccaggtcatgatgtatcacat 335
>gnl|LJGI|FS324580 similar to UniRef100_A7PL47 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 444
Score = 502 bits (253), Expect = e-141
Identities = 256/257 (99%)
Strand = Plus / Plus
Query: 1 atgtcgtcaccgtatccgattctcgacgataaacccatcgatcagtggagggttacggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 atgtcgtcaccgtatccgattctcgacgataaacccatcgatcagtggagggttacggag 247
Query: 61 ctaaaagaggagttaaagagaaggaaactaaccaccaaaggtttaaaggatgatttgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ctaaaagaggagttaaagagaaggaaactaaccaccaaaggtttaaaggatgatttgatc 307
Query: 121 aagcgtttggatcaagctcttcgccttgaaagggatggtgctgatggttctggttctcag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aagcgtttggatcaagctcttcgccttgaaagggatggtgctgatggttctggttctcac 367
Query: 181 aaggatgaggttaatggtttggatggtgatatagctgagctgaacgattcacatatgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaggatgaggttaatggtttggatggtgatatagctgagctgaacgattcacatatgaag 427
Query: 241 actgcagttggtcttga 257
|||||||||||||||||
Sbjct: 428 actgcagttggtcttga 444
>gnl|LJGI|TC82512 similar to UniRef100_Q10KI0 Cluster: SAP domain containing protein,
expressed; n=2; Oryza sativa Japonica Group|Rep: SAP
domain containing protein, expressed - Oryza sativa
subsp. japonica (Rice), partial (14%)
Length = 698
Score = 295 bits (149), Expect = 6e-79
Identities = 556/692 (80%), Gaps = 6/692 (0%)
Strand = Plus / Plus
Query: 926 attcgatggatgttggagagccacataagaaaaagacacctgttgaggaaaatagctata 985
|||| ||||||||||||| || ||| |||||||| || ||||||| ||||||| | |||
Sbjct: 7 attcaatggatgttggagggctgcatgagaaaaaggcatctgttgaagaaaataccaata 66
Query: 986 ataataaaagtccaaacctgaacaatcccaatagcagtgaagttgttgattatccagaaa 1045
||| || ||||||| || | ||||| ||| || |||||| | || | ||||| ||||
Sbjct: 67 atattacaagtccagacttcaacaagaccattaacagtgatgatgcggggtatcccgaaa 126
Query: 1046 agttaaacttggatagaagttctggtgatgattccatggaagaggatttgcctgagagca 1105
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 127 agttgaacttggatagaagttctggtgatgattccatggaagaggatgtgcctgagacta 186
Query: 1106 agcaatatgattctaagtttaatgttgatgaa------cttagagacaagggggagagtg 1159
|||||| ||||||||||||||||||||||||| ||||||||||| ||||||| |
Sbjct: 187 agcaatttgattctaagtttaatgttgatgaacttagtcttagagacaaaggggagaata 246
Query: 1160 ttgaagtgtctatattgaaggaagaaggtcgtactgcagttgtcggagatggtctatctc 1219
||||||| ||||| ||||||| ||| | ||||| |||||| |||||||||||||||
Sbjct: 247 ttgaagtatctattgtgaaggaggaaaataatactgtagttgtgggagatggtctatctg 306
Query: 1220 cagacagaggtgatactcaccatgataatgaaattcctcctgtttcccttgttgagaaac 1279
||| | | ||||||| | | ||| | ||| || ||||||| || | | ||| ||||
Sbjct: 307 cagggaaaagtgatacaaatcttgacattgacatgagtcctgttgccttggctgataaac 366
Query: 1280 gaaagtctcatgatcaagcttctgctgggaacaatgagcctgcaaaacggcaacgaaggt 1339
| || | | ||| ||||| |||| |||||||||||||||||| ||| ||||||| ||||
Sbjct: 367 ggaaatatgctgaacaagcatctgttgggaacaatgagcctgcgaaaaggcaacgcaggt 426
Query: 1340 ggaactctgaaacagttaaaggttcagatcaacaagttccgagcctcagacctgctacta 1399
||| |||||||| |||||| |||||| ||| | | | ||||||| ||||||
Sbjct: 427 ggagtactgaaacacgtaaaggagcagatctgcaaagcactactcccagacctcctacta 486
Query: 1400 caagaaaggatgagccaattgcttcaaaaggcaagttctctaggttggattcctcaacaa 1459
|| |||||||||||| |||| | ||| |||| ||| | |||| ||||||| |
Sbjct: 487 cacccaaggatgagccagttgcgccgaaacgcaacttccccaggtctgattcctttgctg 546
Query: 1460 ttgatgatgcacccaaagaacgcattgttccaccatcacaaagggccccgacatgttccc 1519
|| |||||| || |||||||||||||||||||||||||||||| |||| || |||||
Sbjct: 547 ctgctgatgctcctaaagaacgcattgttccaccatcacaaaggaccccaactaattccc 606
Query: 1520 tcaggattgatcgtttcctccgtccatttaccttaaaagcagtacaagagcttcttggta 1579
|||||||||||||||||||||| ||||||||| |||||||||| ||||| |||||||| |
Sbjct: 607 tcaggattgatcgtttcctccgaccatttaccctaaaagcagtgcaagaacttcttggca 666
Query: 1580 aaactggaaatgtcatcagtttctggatggac 1611
| ||||| || || | ||||||||||||||||
Sbjct: 667 agactgggaaagttagcagtttctggatggac 698
>gnl|LJGI|TC62733 similar to UniRef100_A7PL47 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 1429
Score = 293 bits (148), Expect = 2e-78
Identities = 223/248 (89%)
Strand = Plus / Plus
Query: 646 gactcaaagcctcagctggattgtgacctaaagcccttgtgcgaggatctcacacccaac 705
||||||||||| || ||| | |||||| |||| || | ||||||||||||| ||| ||
Sbjct: 1143 gactcaaagccccaactgcagtgtgacacaaaggccctttgcgaggatctcatgcccgac 1202
Query: 706 tcttctcttcctgaaaatcaggtatctgaggtcaaccctagtttagggtctcacctaaaa 765
|||||| |||| ||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1203 tcttctattccggaaaaccaggtatctgaggtcaaccctagtttagggtctcaagtaaaa 1262
Query: 766 tctgattctatttctagtaattctgtgtcaattaatcaaaagaatgaactaaaggatact 825
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1263 tctgattctatttctactgattctgtgtcaattaatcaaaagaatgaactaaaggatact 1322
Query: 826 ataattgctgataatgttaaattagaggaagatattgttaggccagagatggtggaagaa 885
||||||||||||||||| |||||||| ||||| |||||||||| ||||||||| |||||
Sbjct: 1323 ataattgctgataatgtcaaattagaacaagattttgttaggccggagatggtgcaagaa 1382
Query: 886 ccatcatc 893
||||||||
Sbjct: 1383 ccatcatc 1390
Score = 91.7 bits (46), Expect = 2e-17
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 41 atcagtggagggttacggagctaaaagaggagttaaagagaaggaaactaaccaccaaag 100
||||||||| |||||||||||| | ||||||| | |||||||||| |||| |||||||
Sbjct: 403 atcagtggaaggttacggagctgagagaggagctgaagagaaggaggttaactaccaaag 462
Query: 101 gtttaaaggatgatttgatcaagcgtttggatcaagctcttc 142
|||| ||||||||||| |||| |||||||||| |||| ||||
Sbjct: 463 gtttgaaggatgatttaatcaggcgtttggatgaagcccttc 504
Score = 71.9 bits (36), Expect = 2e-11
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 499 gagaccaccgttacggtcactgaaagtgtcttaacagaagaagtagtcagtggtcaggat 558
|||||||| ||||| ||||||| | ||| |||||||||| |||||||||||||||||||
Sbjct: 1002 gagaccactgttacaatcactgagactgtattaacagaagtagtagtcagtggtcaggat 1061
Query: 559 tctg 562
||||
Sbjct: 1062 tctg 1065
>gnl|LJGI|TC70716 similar to UniRef100_A7PL47 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 1141
Score = 131 bits (66), Expect = 2e-29
Identities = 114/130 (87%)
Strand = Plus / Plus
Query: 1960 gagaaagttgaccgacctattgtcacacttgatgatctctttcgtaaaaccagtgcagct 2019
|||||||| |||| |||||||||||| || ||||||||||| || ||||||| ||| ||
Sbjct: 324 gagaaagtggacccacctattgtcactctggatgatctcttccgcaaaaccacagcaact 383
Query: 2020 cctcgaatttactatttacctttatctgaagagcaagttgcagcaaaacttgcagtacag 2079
||||| || |||||||||||||| ||||||||||||||||| || |||||||||| ||||
Sbjct: 384 cctcggatctactatttacctttgtctgaagagcaagttgccgccaaacttgcagcacag 443
Query: 2080 ggaaagagca 2089
||||| ||||
Sbjct: 444 ggaaaaagca 453
Score = 119 bits (60), Expect = 7e-26
Identities = 105/120 (87%)
Strand = Plus / Plus
Query: 1654 gaagccattgaaacacgaaatgctgtgtataatctgcaatggcctcgaaatggcggacac 1713
||||||| ||||||||| ||||| ||||||||| |||||||||||| |||||| |||| |
Sbjct: 12 gaagccactgaaacacggaatgccgtgtataatttgcaatggcctccaaatggtggacgc 71
Query: 1714 cttttagttgctgagtatgtggatcctcaagaagtgaaaatgaagctagaacctactcct 1773
|| ||| ||||||||||||| |||||| |||| |||||||||||| ||||| || |||||
Sbjct: 72 ctcttaattgctgagtatgttgatcctgaagatgtgaaaatgaagttagaagctcctcct 131
>gnl|LJGI|TC80683 similar to UniRef100_A7PL47 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 486
Score = 71.9 bits (36), Expect = 2e-11
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 51 ggttacggagctaaaagaggagttaaagagaaggaaactaaccaccaaaggtttaaagga 110
|||||||||||| | ||||||| | || ||||||| |||| ||||||||||| |||||
Sbjct: 394 ggttacggagctgagagaggagctgaacagaaggaggttaactaccaaaggtttgaagga 453
Query: 111 tgatttgatcaagcgtttggatcaagctcttc 142
|||||| |||| |||||||||| |||| ||||
Sbjct: 454 tgatttaatcaggcgtttggatgaagcccttc 485
>gnl|LJGI|CB827913 similar to UniRef100_UPI0000ECAEC5 Cluster: Alpha-fetoprotein
enhancer-binding protein; n=1; Gallus gallus|Rep:
Alpha-fetoprotein, partial (0%)
Length = 567
Score = 69.9 bits (35), Expect = 6e-11
Identities = 110/135 (81%)
Strand = Plus / Plus
Query: 854 aagatattgttaggccagagatggtggaagaaccatcatcaaataatgatatcccaggtc 913
||||| |||||||||| ||| ||||| ||||||||||||| | |||||| || | |
Sbjct: 425 aagattttgttaggccggagttggtgcaagaaccatcatccagaaatgatgaacctgttt 484
Query: 914 atgatgtatcacattcgatggatgttggagagccacataagaaaaagacacctgttgagg 973
|||||| |||| |||| ||||||||||||| || ||| |||||||| || ||||||| |
Sbjct: 485 atgatgaatcaaattcaatggatgttggagggctgcatgagaaaaaggcatctgttgaag 544
Query: 974 aaaatagctataata 988
|||||| | ||||||
Sbjct: 545 aaaataccaataata 559