Miyakogusa Predicted Gene
- Lj4g3v2802770.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2802770.1 Non Chatacterized Hit- tr|I1KT70|I1KT70_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,79.78,0,CTD_bind,RNA
polymerase II-binding domain; SUBFAMILY NOT NAMED,NULL;
CYCLIN-DEPENDENT KINASE INHIBIT,CUFF.51674.1
(1110 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81431 similar to UniRef100_A7PL45 Cluster: Chromosome... 1076 0.0
gnl|LJGI|GO033941 similar to UniRef100_A7PL45 Cluster: Chromosom... 636 0.0
gnl|LJGI|TC67800 similar to UniRef100_A7PL45 Cluster: Chromosome... 563 e-160
gnl|LJGI|TC66379 similar to UniRef100_A7PL45 Cluster: Chromosome... 252 4e-66
>gnl|LJGI|TC81431 similar to UniRef100_A7PL45 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 792
Score = 1076 bits (543), Expect = 0.0
Identities = 543/543 (100%)
Strand = Plus / Plus
Query: 1 atgagtgtcactagcaccttcaatgagcagattcttgcggacaagatgtccaagatcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 atgagtgtcactagcaccttcaatgagcagattcttgcggacaagatgtccaagatcaac 309
Query: 61 agcacccagcaatgcgttgagactttatcacattggtgtatattccaccaaagcaaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agcacccagcaatgcgttgagactttatcacattggtgtatattccaccaaagcaaagca 369
Query: 121 gaactagttgttggaacatgggataaacaatttcacaattcagagaagggtaagcgggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gaactagttgttggaacatgggataaacaatttcacaattcagagaagggtaagcgggtc 429
Query: 181 ccccttctgtatcttgcaaatgacatcttgcagaacagcaaacgtaaaggaaatgaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ccccttctgtatcttgcaaatgacatcttgcagaacagcaaacgtaaaggaaatgaattt 489
Query: 241 gtgactgagttttggaaggttcttcctaattcacttaaagatgttcttgacaagggtgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gtgactgagttttggaaggttcttcctaattcacttaaagatgttcttgacaagggtgag 549
Query: 301 gatcacgaaaagcgtgtggcatctagactggtggatatatgggaggaaaggaaagtgttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gatcacgaaaagcgtgtggcatctagactggtggatatatgggaggaaaggaaagtgttt 609
Query: 361 ggatctatggcacagaaccttaagaatgtaattcttggagtagaagcacctccaccgttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ggatctatggcacagaaccttaagaatgtaattcttggagtagaagcacctccaccgttg 669
Query: 421 gagttcaacaaaaagcgatcccgtacgggatctgtacgaattgtgaaaaaggattctcgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gagttcaacaaaaagcgatcccgtacgggatctgtacgaattgtgaaaaaggattctcgc 729
Query: 481 tccattagaacgaaattgaccattggaggtccggcggaaaaaatagtctcagcctttcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tccattagaacgaaattgaccattggaggtccggcggaaaaaatagtctcagcctttcat 789
Query: 541 gca 543
|||
Sbjct: 790 gca 792
>gnl|LJGI|GO033941 similar to UniRef100_A7PL45 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 669
Score = 636 bits (321), Expect = 0.0
Identities = 321/321 (100%)
Strand = Plus / Plus
Query: 790 caggaatctgaattggagaatgttcgtactcagattcaggtagcacaagcacaagcagaa 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 caggaatctgaattggagaatgttcgtactcagattcaggtagcacaagcacaagcagaa 228
Query: 850 gagtctagcttcatgaggaaacgacttgaaaatgaagaaatttcatataaaccatcatcc 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gagtctagcttcatgaggaaacgacttgaaaatgaagaaatttcatataaaccatcatcc 288
Query: 910 tcaacaacttcagttattgatacaaatgcaaaatcagaagcagcaactaagaagtcggct 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tcaacaacttcagttattgatacaaatgcaaaatcagaagcagcaactaagaagtcggct 348
Query: 970 tcaacaattgcagcagaggttgcagataaactagcagcttcttcatcatctcaattcatc 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tcaacaattgcagcagaggttgcagataaactagcagcttcttcatcatctcaattcatc 408
Query: 1030 atgacttctgttctcgaaacgtttgcagctgaggaggctaaaaatgctggtctagcttct 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 atgacttctgttctcgaaacgtttgcagctgaggaggctaaaaatgctggtctagcttct 468
Query: 1090 gagtccatgtcaaaacctgag 1110
|||||||||||||||||||||
Sbjct: 469 gagtccatgtcaaaacctgag 489
>gnl|LJGI|TC67800 similar to UniRef100_A7PL45 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 988
Score = 563 bits (284), Expect = e-160
Identities = 284/284 (100%)
Strand = Plus / Plus
Query: 827 aggtagcacaagcacaagcagaagagtctagcttcatgaggaaacgacttgaaaatgaag 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggtagcacaagcacaagcagaagagtctagcttcatgaggaaacgacttgaaaatgaag 120
Query: 887 aaatttcatataaaccatcatcctcaacaacttcagttattgatacaaatgcaaaatcag 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatttcatataaaccatcatcctcaacaacttcagttattgatacaaatgcaaaatcag 180
Query: 947 aagcagcaactaagaagtcggcttcaacaattgcagcagaggttgcagataaactagcag 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagcagcaactaagaagtcggcttcaacaattgcagcagaggttgcagataaactagcag 240
Query: 1007 cttcttcatcatctcaattcatcatgacttctgttctcgaaacgtttgcagctgaggagg 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttcttcatcatctcaattcatcatgacttctgttctcgaaacgtttgcagctgaggagg 300
Query: 1067 ctaaaaatgctggtctagcttctgagtccatgtcaaaacctgag 1110
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctaaaaatgctggtctagcttctgagtccatgtcaaaacctgag 344
>gnl|LJGI|TC66379 similar to UniRef100_A7PL45 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 877
Score = 252 bits (127), Expect = 4e-66
Identities = 375/458 (81%), Gaps = 6/458 (1%)
Strand = Plus / Plus
Query: 28 cagattcttgcggacaagatgtccaagatcaacagcacccagcaatgcgttgagacttta 87
||||| |||||||| ||| | |||||| | || | ||||||||| ||| |||| ||||||
Sbjct: 407 cagatacttgcggataagctttccaagcttaataacacccagcagtgcattgaaacttta 466
Query: 88 tcacattggtgtatattccaccaaagcaaagcagaactagttgttggaacatgggataaa 147
||||||||||||||||| |||| |||||||| ||||| ||||||| ||||||| | |||
Sbjct: 467 tcacattggtgtatatttcaccggagcaaagctgaactggttgttgcaacatggaaaaaa 526
Query: 148 caatttcacaattcagagaagggtaagcgggtcccccttctgtatcttgcaaatgacatc 207
|||||| ||| || |||| || | | | || |||||| ||||||||||||||||||||
Sbjct: 527 caatttgacatatcggagatggctcaaagagtaccccttttgtatcttgcaaatgacatc 586
Query: 208 ttgcagaacagcaaacgtaaaggaaatgaatttgtgactgagttttggaaggttcttcct 267
||||||||||||| |||||||||||||| ||||||| |||||| |||||||||||||||
Sbjct: 587 ctgcagaacagcaagcgtaaaggaaatgagtttgtgaatgagttctggaaggttcttcct 646
Query: 268 aattcacttaaagatgttcttgacaagggtgaggatcacgaaaagcgtgtggcatctaga 327
| |||| ||||||||| |||| || ||| ||||| | ||| ||||||| ||||||
Sbjct: 647 gaagcactaaaagatgttattgaaaaaaatgatgatcaaggaaaacgtgtggtgtctaga 706
Query: 328 ctggtggatatatgggaggaaaggaaagtgtttggatctatggcacagaaccttaagaat 387
||| | || |||||||| |||| || ||||| |||||| |||| ||||||||| ||
Sbjct: 707 ctgtttgaagtatgggagcaaagaaaggtgttcggatctcaggcaaggaaccttaaagat 766
Query: 388 gtaattcttggagtagaagcacctccaccgttggagttcaacaaaaagcgatcccgtacg 447
|||| ||||||| | ||||||||||||| ||||| ||| |||||||||||| |||
Sbjct: 767 ctaatgcttggagaaaaagcacctccaccattggaaatcagcaaaaagcgatcacgt--- 823
Query: 448 ggatctgtacgaattgtgaaaaaggattctcgctccat 485
|||||| |||||||||||| ||||||||| |||||
Sbjct: 824 ---tctgtaagaattgtgaaaagggattctcgatccat 858