Miyakogusa Predicted Gene
- Lj4g3v2799410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2799410.1 tr|G7LB97|G7LB97_MEDTR Nuclear transcription
factor Y subunit B-3 OS=Medicago truncatula GN=NF-YB7
P,66.67,0,Histone-fold,Histone-fold; no description,Histone-fold;
NFYB_HAP3,Transcription factor, NFYB/HAP3, c,CUFF.51650.1
(678 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76034 homologue to UniRef100_A7Q978 Cluster: Chromoso... 127 1e-28
gnl|LJGI|TC61670 homologue to UniRef100_A7Q978 Cluster: Chromoso... 115 4e-25
gnl|LJGI|TC69613 homologue to UniRef100_A7NZC8 Cluster: Chromoso... 88 8e-17
gnl|LJGI|GO036362 similar to UniRef100_A7PTW4 Cluster: Chromosom... 54 1e-06
gnl|LJGI|TC66390 similar to UniRef100_A7PTW4 Cluster: Chromosome... 54 1e-06
>gnl|LJGI|TC76034 homologue to UniRef100_A7Q978 Cluster: Chromosome chr19
scaffold_66, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_66, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (41%)
Length = 478
Score = 127 bits (64), Expect = 1e-28
Identities = 175/212 (82%)
Strand = Plus / Plus
Query: 82 gagcaagacaggttcctccccatagccaacgtgagcagaatcatgaagaaagcaccccca 141
||||| |||||||| || || ||||| ||||||||||| ||||||||||| || | ||
Sbjct: 258 gagcaggacaggtttctgccgatagcgaacgtgagcaggatcatgaagaaggcgcttccc 317
Query: 142 gccaatgcaaaaatctcaaaggaagcaaaggaaacagtgcaggaatgtgtctctgagttc 201
|| || || || ||||| ||||| || ||||| || |||||||| || || || ||||||
Sbjct: 318 gcaaacgcgaagatctcgaaggacgcgaaggagacggtgcaggagtgcgtgtcggagttc 377
Query: 202 ataagcttcatcactggtgaagcctctgacaagtgtcagagggaaaagaggaagacaatc 261
|||||||||||||| || |||||||| |||||||| |||||||| ||| ||||||| |||
Sbjct: 378 ataagcttcatcaccggcgaagcctccgacaagtgccagagggagaagcggaagacgatc 437
Query: 262 aacggtgatgatcttctctgggccatgacaac 293
||||| || || | || ||||||||||||||
Sbjct: 438 aacggcgacgacttgctgtgggccatgacaac 469
>gnl|LJGI|TC61670 homologue to UniRef100_A7Q978 Cluster: Chromosome chr19
scaffold_66, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_66, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (66%)
Length = 1236
Score = 115 bits (58), Expect = 4e-25
Identities = 178/218 (81%)
Strand = Plus / Plus
Query: 82 gagcaagacaggttcctccccatagccaacgtgagcagaatcatgaagaaagcaccccca 141
||||| ||| ||||||| || ||||| ||||||||||| ||||||||||| || ||
Sbjct: 477 gagcaggaccggttcctgccgatagcgaacgtgagcaggatcatgaagaaggcgttgccg 536
Query: 142 gccaatgcaaaaatctcaaaggaagcaaaggaaacagtgcaggaatgtgtctctgagttc 201
|| || || || ||||| ||||| || ||||| || |||||||| || || || ||||||
Sbjct: 537 gcgaacgcgaagatctcgaaggacgcgaaggagacggtgcaggagtgcgtgtcggagttc 596
Query: 202 ataagcttcatcactggtgaagcctctgacaagtgtcagagggaaaagaggaagacaatc 261
|||||||||||||| || || ||||| |||||||| ||| |||| ||| ||||||| |||
Sbjct: 597 ataagcttcatcaccggcgaggcctccgacaagtgccagcgggagaagcggaagacgatc 656
Query: 262 aacggtgatgatcttctctgggccatgacaacccttgg 299
||||| ||||| || || ||||||||||| || |||||
Sbjct: 657 aacggcgatgacctgctgtgggccatgacgacgcttgg 694
>gnl|LJGI|TC69613 homologue to UniRef100_A7NZC8 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 985
Score = 87.7 bits (44), Expect = 8e-17
Identities = 161/200 (80%)
Strand = Plus / Plus
Query: 85 caagacaggttcctccccatagccaacgtgagcagaatcatgaagaaagcacccccagcc 144
|||||||||| ||| || || |||||| | ||| | |||||||||||||| | ||| |||
Sbjct: 209 caagacaggtaccttccaatcgccaacatcagccgcatcatgaagaaagctctccccgcc 268
Query: 145 aatgcaaaaatctcaaaggaagcaaaggaaacagtgcaggaatgtgtctctgagttcata 204
|||| |||||| | || || |||||||| || || || || || ||||| || |||||
Sbjct: 269 aatggcaaaatcgccaaagacgcaaaggagactgttcaagagtgcgtctccgaattcatc 328
Query: 205 agcttcatcactggtgaagcctctgacaagtgtcagagggaaaagaggaagacaatcaac 264
||||||||||| | || |||||||| ||||||||| | || ||||||||||| || |||
Sbjct: 329 agcttcatcaccagcgaggcctctgataagtgtcagcgagagaagaggaagacgattaac 388
Query: 265 ggtgatgatcttctctgggc 284
||||| ||| | ||||||||
Sbjct: 389 ggtgacgatttgctctgggc 408
>gnl|LJGI|GO036362 similar to UniRef100_A7PTW4 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 679
Score = 54.0 bits (27), Expect = 1e-06
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 145 aatgcaaaaatctcaaaggaagcaaaggaaacagtgcaggaatgtgtctctgagttcata 204
||||| |||||||| || ||||| |||||||| |||| || |||||||| ||||| |
Sbjct: 211 aatgccaaaatctccaaagaagctaaggaaaccatgcaagagtgtgtctccgagtttgtg 270
Query: 205 agcttcatcactggtgaagcctctgacaagtgtca 239
||||| | ||||| ||||| ||||||||||||||
Sbjct: 271 agctttgtgactggggaagcttctgacaagtgtca 305
>gnl|LJGI|TC66390 similar to UniRef100_A7PTW4 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 605
Score = 54.0 bits (27), Expect = 1e-06
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 145 aatgcaaaaatctcaaaggaagcaaaggaaacagtgcaggaatgtgtctctgagttcata 204
||||| |||||||| || ||||| |||||||| |||| || |||||||| ||||| |
Sbjct: 120 aatgccaaaatctccaaagaagctaaggaaaccatgcaagagtgtgtctccgagtttgtg 179
Query: 205 agcttcatcactggtgaagcctctgacaagtgtca 239
||||| | ||||| ||||| ||||||||||||||
Sbjct: 180 agctttgtgactggggaagcttctgacaagtgtca 214