Miyakogusa Predicted Gene
- Lj4g3v2789340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2789340.1 Non Chatacterized Hit- tr|C5XW36|C5XW36_SORBI
Putative uncharacterized protein Sb04g004670
OS=Sorghu,28.85,3e-18,FtsH protease domain-like,NULL;
seg,NULL,CUFF.51670.1
(996 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66375 similar to UniRef100_A7PL17 Cluster: Chromosome... 1974 0.0
gnl|LJGI|AV776290 similar to UniRef100_Q9SJ03 Cluster: Expressed... 341 5e-93
>gnl|LJGI|TC66375 similar to UniRef100_A7PL17 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (90%)
Length = 2029
Score = 1974 bits (996), Expect = 0.0
Identities = 996/996 (100%)
Strand = Plus / Plus
Query: 1 atggcttactcattatccctgcccaaaccatgctactcccataacttccattatcaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28 atggcttactcattatccctgcccaaaccatgctactcccataacttccattatcaccat 87
Query: 61 caaagatgcttcaagatcaacctccccaaatggaccactagagcttcctctgctgcccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 caaagatgcttcaagatcaacctccccaaatggaccactagagcttcctctgctgcccct 147
Query: 121 ggtgttgaactcaacactcttgaatctgccattgccaagaaagatagcaatgctgttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ggtgttgaactcaacactcttgaatctgccattgccaagaaagatagcaatgctgttaaa 207
Query: 181 gaagcacttgatcagctgagtgaaggtggttgggccaagaaatggggttcacagccatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaagcacttgatcagctgagtgaaggtggttgggccaagaaatggggttcacagccatat 267
Query: 241 gtttcacgtcgtacgacatcacttagagagctgacaactctgggaattaaaaatgctgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gtttcacgtcgtacgacatcacttagagagctgacaactctgggaattaaaaatgctgag 327
Query: 301 aaccttgcaattcctagtgtcagaaatgatgcagcttttctctttactgttgttggaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aaccttgcaattcctagtgtcagaaatgatgcagcttttctctttactgttgttggaaca 387
Query: 361 actggatttttgggtattctgactggtcagcttcccggggattggggcttttttgtacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 actggatttttgggtattctgactggtcagcttcccggggattggggcttttttgtacca 447
Query: 421 tacttgattggaagtatatccctagtggttttagctgtgggtagcatatcccctgggctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tacttgattggaagtatatccctagtggttttagctgtgggtagcatatcccctgggctt 507
Query: 481 ctccaagcagctattggcagcttttcaacagtttttcctgattatcaagagaggattgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ctccaagcagctattggcagcttttcaacagtttttcctgattatcaagagaggattgct 567
Query: 541 agacatgaagcagcacactttttgattgcttatctgcttggtgtacccattttggggtat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 agacatgaagcagcacactttttgattgcttatctgcttggtgtacccattttggggtat 627
Query: 601 tcgctggatattgggaaagagcatgtcaatctcattgatcagaggcttgaaaagcttatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tcgctggatattgggaaagagcatgtcaatctcattgatcagaggcttgaaaagcttatc 687
Query: 661 tatagtggccagcttaatgctaaagagatagatagattggctgttgtgtcaatggctgga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tatagtggccagcttaatgctaaagagatagatagattggctgttgtgtcaatggctgga 747
Query: 721 ctggcagcagaaggtttaatatatgacaaggtgattggtcaatcagctgatcttttcact 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ctggcagcagaaggtttaatatatgacaaggtgattggtcaatcagctgatcttttcact 807
Query: 781 ctccagagatttataaacagaaccaagcctcaactcagcaaagatcagcaacaaaatctg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ctccagagatttataaacagaaccaagcctcaactcagcaaagatcagcaacaaaatctg 867
Query: 841 actagatgggcagttatgtttgctgctagtctcttgaaaaataacaaggagagtcatgaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 actagatgggcagttatgtttgctgctagtctcttgaaaaataacaaggagagtcatgaa 927
Query: 901 gccttgatggcatcaatgacaaagaaggcaagtgtagtggagtgcattcaaacaatcgaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 gccttgatggcatcaatgacaaagaaggcaagtgtagtggagtgcattcaaacaatcgaa 987
Query: 961 agtgttgcagcagagttcaacattaaatattaaact 996
||||||||||||||||||||||||||||||||||||
Sbjct: 988 agtgttgcagcagagttcaacattaaatattaaact 1023
>gnl|LJGI|AV776290 similar to UniRef100_Q9SJ03 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (12%)
Length = 426
Score = 341 bits (172), Expect = 5e-93
Identities = 256/279 (91%), Gaps = 5/279 (1%)
Strand = Plus / Minus
Query: 723 ggcagcagaaggtttaatatatgacaaggtg-attggtcaatcagctgatcttttcactc 781
||||||||||||| ||||||||||||| ||| | |||||||||||||||||||||||||
Sbjct: 426 ggcagcagaaggtgtaatatatgacaatgtgcaatggtcaatcagctgatcttttcactt 367
Query: 782 tccagagatttataaacagaaccaagcctcaactcag--caaagatcag-caacaaaatc 838
|||||||||| ||| |||||||| ||||||||||||| | |||||||| | || |||||
Sbjct: 366 tccagagattgatatacagaacccagcctcaactcaggcccaagatcaggccaccaaatc 307
Query: 839 tg-actagatgggcagttatgtttgctgctagtctcttgaaaaataacaaggagagtcat 897
|| ||||||||||||| |||||||||||||||||||||| | |||||||||||||||||
Sbjct: 306 tggactagatgggcaggtatgtttgctgctagtctcttgcgatataacaaggagagtcat 247
Query: 898 gaagccttgatggcatcaatgacaaagaaggcaagtgtagtggagtgcattcaaacaatc 957
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 246 gaagccttgatggcatcaatgaccaagaaggcaagtgtagtggagtgcattcaaaccatc 187
Query: 958 gaaagtgttgcagcagagttcaacattaaatattaaact 996
||||||||||||||||||||| ||||| |||||||||||
Sbjct: 186 gaaagtgttgcagcagagttcgacattcaatattaaact 148