Miyakogusa Predicted Gene

Lj4g3v2789200.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2789200.1 Non Chatacterized Hit- tr|C6TJE7|C6TJE7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54065
PE,76.72,0,coiled-coil,NULL; DUF241,Protein of unknown function
DUF241, plant; seg,NULL,CUFF.51649.1
         (903 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO019180 weakly similar to UniRef100_A7R1C5 Cluster: Ch...    90   3e-17

>gnl|LJGI|GO019180 weakly similar to UniRef100_A7R1C5 Cluster: Chromosome undetermined
           scaffold_345, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_345,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (20%)
          Length = 689

 Score = 89.7 bits (45), Expect = 3e-17
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                       
Query: 154 gaagcagacacaattcaaagtgatttggttgtgcttgcagagctatacaactgcatggag 213
           |||||| | |||||||| ||||| |||||| |||||||||| || |||| | ||||||| 
Sbjct: 198 gaagcaaagacaattcagagtgaattggttctgcttgcagaactctacatcagcatggaa 257

                                                                    
Query: 214 gaactcttccaatctccacagactcaacaagctctattgcactaccaaaatgggaaa 270
           || || ||||| ||||||||||| |||||||||||  | ||||||||| ||||||||
Sbjct: 258 gagcttttccattctccacagacccaacaagctcttctacactaccaagatgggaaa 314



 Score = 52.0 bits (26), Expect = 6e-06
 Identities = 46/52 (88%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                               
Query: 361 caaactcttcaatcagcaatacgtagaaga---gggtattcaagcattgaaa 409
           ||||||||||||||||| ||||||||||||   ||  |||||||||||||||
Sbjct: 405 caaactcttcaatcagccatacgtagaagaagaggagattcaagcattgaaa 456