Miyakogusa Predicted Gene
- Lj4g3v2754450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2754450.1 tr|F4XZ00|F4XZ00_9CYAN PAP fibrillin OS=Moorea
producens 3L GN=LYNGBM3L_52540 PE=4 SV=1,33.67,8e-19,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; PAP_fibrillin,Plastid
lipid-associated pr,CUFF.51600.1
(780 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69221 similar to UniRef100_A7QBC1 Cluster: Chromosome... 1497 0.0
gnl|LJGI|AV775599 similar to UniRef100_A7QBC1 Cluster: Chromosom... 143 2e-33
>gnl|LJGI|TC69221 similar to UniRef100_A7QBC1 Cluster: Chromosome chr4 scaffold_73,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_73, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (67%)
Length = 1063
Score = 1497 bits (755), Expect = 0.0
Identities = 772/780 (98%)
Strand = Plus / Plus
Query: 1 atgacaaattcccatgtgagtcctctgatttctagaaccatgaatatcatgaaactgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atgacaaattcccatgtgagtcctctgatttctagaaccatgaatatcatgaaactgcag 196
Query: 61 aattttgtcccagctggaaattgttcaaggataaacaccacctcaagatttggtgaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 aattttgtcccagctggaaattgttcaaggataaacaccacctcaagatttggtgaaaga 256
Query: 121 gcatcatggtttagacccattaccataatgaaagttgcagaacaaagctcaggcttagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gcatcatggtttagacccattaccataatgaaagttgcagaacaaagctcaggcttagtt 316
Query: 181 gaagatgaaacacttgctcagaagaaaagagaactttacatggcggtggaaggaatcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gaagatgaaacacttgctcagaagaaaagagaactttacatggcggtggaaggaatcaat 376
Query: 241 agggggatatttggaatgccatctgcccagaaaattgaaattgagaatttggtgaagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agggggatatttggaatgccatctgcccagaaaattgaaattgagaatttggtgaagcag 436
Query: 301 ctggaatctcagaatccaacaccagacccaactctggaactggagaaggtggctgggtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctggaatctcagaatccaacaccagacccaactctggaactggagaaggtggctgggtgc 496
Query: 361 tggaggcttatttacagtacaatatcaattttgggatccaagaggaccaagttaggcctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tggaggcttatttacagtacaatatcaattttgggatccaagaggaccaagttaggcctc 556
Query: 421 agagactttatctcattgggtgannnnnnncagactattgatgaagtccagagcaaagca 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 557 agagactttatctcattgggtgatttttttcagactattgatgaagtccagagcaaagca 616
Query: 481 gttaatgtgatcaagttcagtgcaagagggttgagtttgctgtctggagagcttagcatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gttaatgtgatcaagttcagtgcaagagggttgagtttgctgtctggagagcttagcatt 676
Query: 541 gaggcctctttcaagattgcttccacaacaagggttgacatcaattatgaaaaatccaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gaggcctctttcaagattgcttccacaacaagggttgacatcaattatgaaaaatccaca 736
Query: 601 atcattcctgatcagttgatgaatttgtttcggaaaaattatgatcttttattgagcatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 atcattcctgatcagttgatgaatttgtttcggaaaaattatgatcttttattgagcatc 796
Query: 661 ttcaatccagagggatggttggaaatcacatatgttgatgattccatgagaataggaagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ttcaatccagagggatggttggaaatcacatatgttgatgattccatgagaataggaagg 856
Query: 721 gatgacaaaggcaatatctttgtattggaaagatctgaagatgataataacccctagcca 780
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 857 gatgacaaaggcaatatctttgtattggaaagatctgaagatgataataacctctagcca 916
>gnl|LJGI|AV775599 similar to UniRef100_A7QBC1 Cluster: Chromosome chr4 scaffold_73,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_73, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 430
Score = 143 bits (72), Expect = 2e-33
Identities = 85/88 (96%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 690 atatgttgatgattccatgagaataggaagggatgacaaaggcaatatctttgtattgga 749
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 278 atatgttgatgattccatgagaataggaagggatgacaagcgcaatatctttgtattgga 219
Query: 750 aagat-ctgaagatgataataaccccta 776
||||| ||||||||||||||||||||||
Sbjct: 218 aagatactgaagatgataataaccccta 191
Score = 129 bits (65), Expect = 3e-29
Identities = 65/65 (100%)
Strand = Plus / Minus
Query: 625 ttgtttcggaaaaattatgatcttttattgagcatcttcaatccagagggatggttggaa 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttgtttcggaaaaattatgatcttttattgagcatcttcaatccagagggatggttggaa 371
Query: 685 atcac 689
|||||
Sbjct: 370 atcac 366