Miyakogusa Predicted Gene
- Lj4g3v2754280.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2754280.1 tr|I1J4I8|I1J4I8_SOYBN Cytosine-specific
methyltransferase OS=Glycine max PE=3 SV=1,75.16,0,seg,NULL;
DNA_methylase,C-5 cytosine methyltransferase; Chromo,Chromo domain;
CHROMO_2,Chromo domain,NODE_65021_length_2143_cov_28.247316.path2.1
(1830 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65123 similar to UniRef100_A7P020 Cluster: Cytosine-s... 1435 0.0
gnl|LJGI|DC593415 weakly similar to UniRef100_A7P020 Cluster: Cy... 515 e-145
gnl|LJGI|BP056390 homologue to UniRef100_A7P020 Cluster: Cytosin... 123 4e-27
gnl|LJGI|FS332867 weakly similar to UniRef100_Q94F88 Cluster: DN... 111 2e-23
>gnl|LJGI|TC65123 similar to UniRef100_A7P020 Cluster: Cytosine-specific
methyltransferase; n=1; Vitis vinifera|Rep:
Cytosine-specific methyltransferase - Vitis vinifera
(Grape), partial (34%)
Length = 1210
Score = 1435 bits (724), Expect = 0.0
Identities = 738/745 (99%)
Strand = Plus / Plus
Query: 1086 caaatttgcgttgatggaaaatgtagttgatattttaaaattcgaaaatggctattgtgg 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 caaatttgcgttgatggaaaatgtagttgatattttaaaattcgaaaatggctattgtgg 61
Query: 1146 aaggtatgctttgggccgtcttcttcaaatgaattatcaaagtcgcatgggaattatggc 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aaggtatgctttgggccgtcttcttcaaatgaattatcaaagtcgcatgggaattatggc 121
Query: 1206 tgctggagcttatgggcttcctcagtttcgcttgcgtgtcttcatttggggggctgcacc 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgctggagcttatgggcttcctcagtttcgcttgcgtgtcttcatttggggggctgcacc 181
Query: 1266 atctgagaagcttcctcaatttccacttccaacacatgatgttatagtgaggggtgtcat 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atctgagaagcttcctcaatttccacttccaacacatgatgttatagtgaggggtgtcat 241
Query: 1326 tcctgtggagtttgagataaatacagttgcatataatgaaggccacaatgaggcattgca 1385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tcctgtggagtttgagataaatacagttgcatataatgaaggccacaatgaggcattgca 301
Query: 1386 aagaaaacttttgttggaagatgctctttctgaccttccttcgattcagaataatgaaag 1445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aagaaaacttttgttggaagatgctctttctgaccttccttcgattcagaataatgaaag 361
Query: 1446 gcgagatgagatgcaatatgataagcctccccagaccgagttccagaagtttattagatt 1505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcgagatgagatgcaatatgataagcctccccagaccgagttccagaagtttattagatt 421
Query: 1506 aacaaaaaatgaaatgttgggtatttcaaatcaaaaaaggttaaagtctacgcttcatga 1565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aacaaaaaatgaaatgttgggtatttcaaatcaaaaaaggttaaagtctacgcttcatga 481
Query: 1566 ccatcgttcactagaattaaatgtggatgactatcaacgcgtgtgtcggattcctaaaaa 1625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ccatcgttcactagaattaaatgtggatgactatcaacgcgtgtgtcggattcctaaaaa 541
Query: 1626 gaagggtgcatgctttagagatttaccaggtgttcgtgttggaccagataataaggttga 1685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaagggtgcatgctttagagatttaccaggtgttcgtgttggaccagataataaggttga 601
Query: 1686 atgggatcctgatgtacaacgagagtatttggagtcnnnnnnnccattggttcctaatta 1745
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 602 atgggatcctgatgtacaacgagagtatttggagtcaaaaaaaccattggttcctaatta 661
Query: 1746 tgccatgtcttttgtgggtggaaagtcctcgaaaccttttgctcggttatggtgggatga 1805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tgccatgtcttttgtgggtggaaagtcctcgaaaccttttgctcggttatggtgggatga 721
Query: 1806 aactgttccaactgttgtgactaga 1830
|||||||||||||||||||||||||
Sbjct: 722 aactgttccaactgttgtgactaga 746
>gnl|LJGI|DC593415 weakly similar to UniRef100_A7P020 Cluster: Cytosine-specific
methyltransferase; n=1; Vitis vinifera|Rep:
Cytosine-specific methyltransferase - Vitis vinifera
(Grape), partial (14%)
Length = 592
Score = 515 bits (260), Expect = e-145
Identities = 260/260 (100%)
Strand = Plus / Plus
Query: 1 atgtttgaggcatttgatgggaccttacatttcactgcacaatggtactatagagcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atgtttgaggcatttgatgggaccttacatttcactgcacaatggtactatagagcaaag 392
Query: 61 gacacagtcattaaaaatcttgcatttctaattgacgaaccaagacgagttttttattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gacacagtcattaaaaatcttgcatttctaattgacgaaccaagacgagttttttattca 452
Query: 121 gaagttaaggatgacaatccattggattgtcttattgcaaagttgaacattgccagagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gaagttaaggatgacaatccattggattgtcttattgcaaagttgaacattgccagagtt 512
Query: 181 tcactaaatgtggatttggcggcaaaggagaaaactattccactctgtgattattattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tcactaaatgtggatttggcggcaaaggagaaaactattccactctgtgattattattgt 572
Query: 241 gacacacagtatattttgcc 260
||||||||||||||||||||
Sbjct: 573 gacacacagtatattttgcc 592
>gnl|LJGI|BP056390 homologue to UniRef100_A7P020 Cluster: Cytosine-specific
methyltransferase; n=1; Vitis vinifera|Rep:
Cytosine-specific methyltransferase - Vitis vinifera
(Grape), partial (11%)
Length = 477
Score = 123 bits (62), Expect = 4e-27
Identities = 80/86 (93%)
Strand = Plus / Minus
Query: 1745 atgccatgtcttttgtgggtggaaagtcctcgaaaccttttgctcggttatggtgggatg 1804
||||||||||||||||||| |||| ||| || ||||||||||||||||||||||||||||
Sbjct: 477 atgccatgtcttttgtgggcggaacgtcatcaaaaccttttgctcggttatggtgggatg 418
Query: 1805 aaactgttccaactgttgtgactaga 1830
|||||||||| || ||||||||||||
Sbjct: 417 aaactgttcccacagttgtgactaga 392
>gnl|LJGI|FS332867 weakly similar to UniRef100_Q94F88 Cluster: DNA
(cytosine-5)-methyltransferase CMT3; n=1; Arabidopsis
thaliana|Rep: DNA (cytosine-5)-methyltransferase CMT3 -
Arabidopsis thaliana (Mouse-ear cress), partial (7%)
Length = 615
Score = 111 bits (56), Expect = 2e-23
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 1 atgtttgaggcatttgatgggaccttacatttcactgcacaatggtactatagagc 56
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atgtttgaggcatttgatgggaccttacatttcactgcacaatggtactatagagc 615