Miyakogusa Predicted Gene
- Lj4g3v2742810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2742810.1 gi|1370173|emb|Z73936.1|.path2.1
(579 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57210 UniRef100_Q40207 Cluster: RAB1Y; n=1; Lotus jap... 1148 0.0
gnl|LJGI|TC70916 UniRef100_Q40207 Cluster: RAB1Y; n=1; Lotus jap... 1078 0.0
gnl|LJGI|TC58877 homologue to UniRef100_A7NSN5 Cluster: Chromoso... 242 2e-63
>gnl|LJGI|TC57210 UniRef100_Q40207 Cluster: RAB1Y; n=1; Lotus japonicus|Rep: RAB1Y -
Lotus japonicus, complete
Length = 985
Score = 1148 bits (579), Expect = 0.0
Identities = 579/579 (100%)
Strand = Plus / Plus
Query: 1 atgattggtgattctggggttgggaaaagcagtcttcttctctctttcacctccgatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atgattggtgattctggggttgggaaaagcagtcttcttctctctttcacctccgatgaa 162
Query: 61 tttcaggatatgtcccccacaattggtgttgattttaaggtcaaatatgtcgccataggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tttcaggatatgtcccccacaattggtgttgattttaaggtcaaatatgtcgccataggg 222
Query: 121 ggtaaaaagctgaagctcgccatttgggatactgctggccaagagagatttagaacactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ggtaaaaagctgaagctcgccatttgggatactgctggccaagagagatttagaacactt 282
Query: 181 acaagctcttactatagaggggcacaaggaatcatcatggtttatgatgtaacccgacga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 acaagctcttactatagaggggcacaaggaatcatcatggtttatgatgtaacccgacga 342
Query: 241 gatacatttacaaatctttctgaaatatgggcaaaggaaatagatctttattcaacaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gatacatttacaaatctttctgaaatatgggcaaaggaaatagatctttattcaacaaat 402
Query: 301 caagactgcatcaagatgcttgttggaaacaaagtagacaaggagagtgatagggttgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 caagactgcatcaagatgcttgttggaaacaaagtagacaaggagagtgatagggttgtg 462
Query: 361 agtaagaaagagggaatagactttgccagggaatatggttgtctatttatcgaatgcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 agtaagaaagagggaatagactttgccagggaatatggttgtctatttatcgaatgcagt 522
Query: 421 gctaaaactcgagttaacgtacagcagtgctttgaagaacttgttttgaagattttggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gctaaaactcgagttaacgtacagcagtgctttgaagaacttgttttgaagattttggat 582
Query: 481 acacccagcctcttagctgaaggctctaagggggtgaaaaagaacatttttaaggacaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 acacccagcctcttagctgaaggctctaagggggtgaaaaagaacatttttaaggacaag 642
Query: 541 cagcctcaggccgatgcatccacaagtagttgctgctga 579
|||||||||||||||||||||||||||||||||||||||
Sbjct: 643 cagcctcaggccgatgcatccacaagtagttgctgctga 681
>gnl|LJGI|TC70916 UniRef100_Q40207 Cluster: RAB1Y; n=1; Lotus japonicus|Rep: RAB1Y -
Lotus japonicus, partial (98%)
Length = 791
Score = 1078 bits (544), Expect = 0.0
Identities = 579/584 (99%), Gaps = 5/584 (0%)
Strand = Plus / Plus
Query: 1 atgattggtgattctggggttgggaaaagcagtcttcttctctctttcacctccgatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 atgattggtgattctggggttgggaaaagcagtcttcttctctctttcacctccgatgaa 223
Query: 61 tttcaggatatgtcccccacaattggtgttgattttaaggtcaaatatgtcgccataggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tttcaggatatgtcccccacaattggtgttgattttaaggtcaaatatgtcgccataggg 283
Query: 121 ggtaaaaagctgaagctcgccatttgggatactgctggccaagagagatttagaacactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ggtaaaaagctgaagctcgccatttgggatactgctggccaagagagatttagaacactt 343
Query: 181 acaagctcttactatagaggggcacaaggaatcatcatggtttatgatgtaacccgacga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 acaagctcttactatagaggggcacaaggaatcatcatggtttatgatgtaacccgacga 403
Query: 241 gatacatttacaaatctttctgaaatatgggcaaaggaaatagatctttattcaacaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gatacatttacaaatctttctgaaatatgggcaaaggaaatagatctttattcaacaaat 463
Query: 301 caagactgcatcaagatgcttgttggaaacaaagtagacaaggagagtgatagggttgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 caagactgcatcaagatgcttgttggaaacaaagtagacaaggagagtgatagggttgtg 523
Query: 361 agtaag-aaagagggaatagactttgccaggg-aatatgg-ttgtcta-tttatcgaatg 416
|||||| ||||||||||||||||||||||||| ||||||| ||||||| |||||||||||
Sbjct: 524 agtaagaaaagagggaatagactttgccagggaaatatggtttgtctattttatcgaatg 583
Query: 417 cagtgctaaaactcgagttaacgtacagcagtgc-tttgaagaacttgttttgaagattt 475
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 584 cagtgctaaaactcgagttaacgtacagcagtgcttttgaagaacttgttttgaagattt 643
Query: 476 tggatacacccagcctcttagctgaaggctctaagggggtgaaaaagaacatttttaagg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tggatacacccagcctcttagctgaaggctctaagggggtgaaaaagaacatttttaagg 703
Query: 536 acaagcagcctcaggccgatgcatccacaagtagttgctgctga 579
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 acaagcagcctcaggccgatgcatccacaagtagttgctgctga 747
>gnl|LJGI|TC58877 homologue to UniRef100_A7NSN5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 885
Score = 242 bits (122), Expect = 2e-63
Identities = 410/506 (81%)
Strand = Plus / Plus
Query: 1 atgattggtgattctggggttgggaaaagcagtcttcttctctctttcacctccgatgaa 60
|||||||| ||||| |||||||| ||||||| || |||||| |||||||| |||
Sbjct: 188 atgattggggattcaggggttggcaaaagcacgctgcttctcagcttcacctctgatacg 247
Query: 61 tttcaggatatgtcccccacaattggtgttgattttaaggtcaaatatgtcgccataggg 120
||| ||||| | || ||||| || ||||| ||||| || || ||||| || | || ||
Sbjct: 248 tttgaggatctttctcccactatcggtgtggatttcaaagttaaatacgttacaattggt 307
Query: 121 ggtaaaaagctgaagctcgccatttgggatactgctggccaagagagatttagaacactt 180
|| |||||| | || || || |||||||| || ||||| || || || ||||||||||||
Sbjct: 308 gggaaaaagttaaaacttgctatttgggacacagctggacaggaaaggtttagaacactt 367
Query: 181 acaagctcttactatagaggggcacaaggaatcatcatggtttatgatgtaacccgacga 240
|| || || || |||||||| ||||||||||| || ||||| ||||||||||| |||||
Sbjct: 368 actagttcatattatagaggagcacaaggaataattatggtatatgatgtaactcgacgg 427
Query: 241 gatacatttacaaatctttctgaaatatgggcaaaggaaatagatctttattcaacaaat 300
|| || ||||||||||| ||||| |||||||| || ||||| ||||| || || ||||||
Sbjct: 428 gagacctttacaaatctatctgatatatgggccaaagaaattgatctatactctacaaat 487
Query: 301 caagactgcatcaagatgcttgttggaaacaaagtagacaaggagagtgatagggttgtg 360
|||||||| |||||||||||||| ||||||||||| || ||||| ||||| ||||||||
Sbjct: 488 caagactgtatcaagatgcttgtaggaaacaaagttgataaggaaagtgaaagggttgtc 547
Query: 361 agtaagaaagagggaatagactttgccagggaatatggttgtctatttatcgaatgcagt 420
|| || || || || || |||||||| ||||||||||| ||||| | || ||||| |||
Sbjct: 548 agcaaaaaggaagggattgactttgctagggaatatggatgtctttatactgaatgtagt 607
Query: 421 gctaaaactcgagttaacgtacagcagtgctttgaagaacttgttttgaagattttggat 480
|| ||||| ||||| || || |||||| |||||||| ||||| |||||||||||||
Sbjct: 608 gcaaaaacccgagtaaatgttgtgcagtgttttgaagagcttgtaatgaagattttggag 667
Query: 481 acacccagcctcttagctgaaggctc 506
||||| |||||||| ||||| |||||
Sbjct: 668 acaccaagcctcttggctgatggctc 693