Miyakogusa Predicted Gene

Lj4g3v2742760.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2742760.1 Non Chatacterized Hit- tr|I3SY87|I3SY87_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; HISTONE DEACETYLASE,Histone deacetylase superfamily;
seg,NULL; no descript,NODE_26479_length_899_cov_104.684090.path2.1
         (651 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68958 similar to UniRef100_Q941D6 Cluster: Histone de...   692   0.0  

>gnl|LJGI|TC68958 similar to UniRef100_Q941D6 Cluster: Histone deacetylase 14; n=1;
           Arabidopsis thaliana|Rep: Histone deacetylase 14 -
           Arabidopsis thaliana (Mouse-ear cress), partial (27%)
          Length = 540

 Score =  692 bits (349), Expect = 0.0
 Identities = 349/349 (100%)
 Strand = Plus / Plus

                                                                       
Query: 303 atgtgctcaaagatttaagccagacatcatccttgtttctgccgggtatgatggtcacgt 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtgctcaaagatttaagccagacatcatccttgtttctgccgggtatgatggtcacgt 60

                                                                       
Query: 363 gttggatccactagcaaatcttcaatttacaactgggacatattacatgcttgcatccag 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gttggatccactagcaaatcttcaatttacaactgggacatattacatgcttgcatccag 120

                                                                       
Query: 423 tatcaaacaactagcaaaagatttatgtgggggtcgatgtgtgtttttcttggaaggagg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatcaaacaactagcaaaagatttatgtgggggtcgatgtgtgtttttcttggaaggagg 180

                                                                       
Query: 483 atacaatctcaagtctctttcatattcagtggccgactcattccgtgctctcatcgggga 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atacaatctcaagtctctttcatattcagtggccgactcattccgtgctctcatcgggga 240

                                                                       
Query: 543 tcaaagcttggcatccgagttcgataaccccaacattttgtatgaagagccaacagctaa 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaaagcttggcatccgagttcgataaccccaacattttgtatgaagagccaacagctaa 300

                                                            
Query: 603 gattaagcaagcaattcagaggattaaacacattcattccctgtgaggt 651
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gattaagcaagcaattcagaggattaaacacattcattccctgtgaggt 349