Miyakogusa Predicted Gene

Lj4g3v2731650.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2731650.1 Non Chatacterized Hit- tr|I1K4G5|I1K4G5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38440 PE,51.93,0,no
description,Zinc finger, RING/FYVE/PHD-type; Ring finger,Zinc finger,
RING-type; zf-RING_2,Zinc f,CUFF.51575.1
         (1278 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW627222 similar to UniRef100_Q8QQX9 Cluster: MEQ; n=1;...   991   0.0  

>gnl|LJGI|BW627222 similar to UniRef100_Q8QQX9 Cluster: MEQ; n=1; Gallid herpesvirus
           2|Rep: MEQ - Meleagrid herpesvirus 1 (MeHV-1), partial
           (4%)
          Length = 530

 Score =  991 bits (500), Expect = 0.0
 Identities = 503/504 (99%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggaaaatcaaaacaacaagcatcacactcagttcactcatcatatcataaccttaattgc 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27  ggaaaatcaaaacaacaagcatcacactcagttcactcatcatatcataaccttaattgc 86

                                                                       
Query: 66  attcattcacagccttgtatatctcaaaacaaaactcctctgtttttcaccctgttttgt 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  attcattcacagccttgtatatctcaaaacaaaactcctctgtttttcaccctgttttgt 146

                                                                       
Query: 126 ttcgctaatcatggctttccatcacagaaaattgctgcaccacaaaatttcagcaccaac 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ttcgctaatcatggctttccatcacagaaaattgctgcaccacaaaatttcagcaccaac 206

                                                                       
Query: 186 accttcccctcttcaaccaccaccaattttactcccaaagccactgttccctcttccatt 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 accttcccctcttcaaccaccaccaattttactcccaaagccactgttccctcttccatt 266

                                                                       
Query: 246 cacttcccacagtttccaccatttcaaactcaaagcacttccactcgccatggtaatcat 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cacttcccacagtttccaccatttcaaactcaaagcacttccactcgccatggtaatcat 326

                                                                       
Query: 306 agcttccatgtgttgcatgttcacgtttctttgctgcgtctccatcatcataagaaggta 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agcttccatgtgttgcatgttcacgtttctttgctgcgtctccatcatcataagaaggta 386

                                                                       
Query: 366 ctattcttcaaggagaagatatatcaataaccagagaagcagaacaaccacgccgatttt 425
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ctattcttcaaggaggagatatatcaataaccagagaagcagaacaaccacgccgatttt 446

                                                                       
Query: 426 gttcgatgtgagcggcgattcttctccggttttcgatgatggcgtggagtcgccggcgct 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gttcgatgtgagcggcgattcttctccggttttcgatgatggcgtggagtcgccggcgct 506

                                   
Query: 486 acagtttgttgaccaccccatatg 509
           ||||||||||||||||||||||||
Sbjct: 507 acagtttgttgaccaccccatatg 530