Miyakogusa Predicted Gene

Lj4g3v2731630.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2731630.1 tr|B9H6P8|B9H6P8_POPTR Endoplasmic reticulum
[ER]-type calcium ATPase OS=Populus trichocarpa
GN=POPT,69.93,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; Calcium ATPase, transmembrane domain M,NU,CUFF.51576.1
         (2847 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO018721 similar to UniRef100_A7R0H6 Cluster: Chromosom...   743   0.0  
gnl|LJGI|BP042017 similar to UniRef100_A7R0H6 Cluster: Chromosom...   618   e-176

>gnl|LJGI|GO018721 similar to UniRef100_A7R0H6 Cluster: Chromosome undetermined
            scaffold_309, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_309, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (13%)
          Length = 406

 Score =  743 bits (375), Expect = 0.0
 Identities = 399/403 (99%), Gaps = 3/403 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2346 tttcatatacagtgtgggacaaattgctatcccttgggacaagatggatgaagagtatgt 2405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tttcatatacagtgtgggacaaattgctatcccttgggacaagatggatgaagagtatgt 60

                                                                        
Query: 2406 gaagactcctcacaaattttcagggaaagggttaccaatgttcatattgtggaatgcacc 2465
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gaagactcctcacaaattttcagggaaagggttaccaatgttcatattgtggaatgcacc 120

                                                                        
Query: 2466 tgtgtgcactctctgtgatgttgcaacactcttgtttctctggttctattacaagtctta 2525
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tgtgtgtactctctgtgatgttgcaacactcttgtttctctggttctattacaagtctta 180

                                                                        
Query: 2526 tgatgacttggaagataaattcttccattcagcttggtttattgagggtcttctcatgca 2585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tgatgacttggaagataaattcttccattcagcttggtttattgagggtcttctcatgca 240

                                                                        
Query: 2586 gacactcatcatccatttgattaggacagagaaagtccctttcatacaggatgttgcttc 2645
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 241  gacactcatcatccatttgattaggacagagaaagt-cctttcatacaggatgttgcttc 299

                                                                        
Query: 2646 ttggccagtgatttgttccactcttgtggtttctgctattggaattgcatttccattcac 2705
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 300  ttggccagtgatttgttccactcttgtggtttctgctattgg-attgcatttccattcac 358

                                                       
Query: 2706 acccattgggaaggtcatgggattcattgttttacctgtctca 2748
            |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 359  acccattgggaagg-catgggattcattgttttacctgtctca 400


>gnl|LJGI|BP042017 similar to UniRef100_A7R0H6 Cluster: Chromosome undetermined
           scaffold_309, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_309,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (13%)
          Length = 470

 Score =  618 bits (312), Expect = e-176
 Identities = 312/312 (100%)
 Strand = Plus / Plus

                                                                       
Query: 515 atagcagctcgaaagcagctaagaggctttcagaatttttgagatgcccggtgcgagttc 574
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atagcagctcgaaagcagctaagaggctttcagaatttttgagatgcccggtgcgagttc 60

                                                                       
Query: 575 aaagatgtgccggtagagttgtgcagacagaattgaaggttcaagttgatcacagggatg 634
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaagatgtgccggtagagttgtgcagacagaattgaaggttcaagttgatcacagggatg 120

                                                                       
Query: 635 tagttcctggtgacattgtgatttttgaacctggggacctctttccaggggatatcagat 694
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagttcctggtgacattgtgatttttgaacctggggacctctttccaggggatatcagat 180

                                                                       
Query: 695 tgttatcttcaacacatcttgttgtaagccaggcctcattaactggggagtcttggacaa 754
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgttatcttcaacacatcttgttgtaagccaggcctcattaactggggagtcttggacaa 240

                                                                       
Query: 755 cggaaaaaactgctgatgttagagaagatcacagcacacctttactagatttaaagaaca 814
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cggaaaaaactgctgatgttagagaagatcacagcacacctttactagatttaaagaaca 300

                       
Query: 815 tctgctttatgg 826
           ||||||||||||
Sbjct: 301 tctgctttatgg 312