Miyakogusa Predicted Gene
- Lj4g3v2730340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2730340.1 Non Chatacterized Hit- tr|D8SEY2|D8SEY2_SELML
Putative uncharacterized protein OS=Selaginella
moelle,48.67,0.00000000000004,seg,NULL; eIF-4B,Plant specific
eukaryotic initiation factor 4B; SUBFAMILY NOT NAMED,NULL; FAMILY
NO,NODE_16003_length_761_cov_234.578186.path2.1
(795 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC594030 similar to UniRef100_Q9SQK7 Cluster: EIF4B; n=... 848 0.0
gnl|LJGI|TC71911 weakly similar to UniRef100_Q9M7E8 Cluster: Euk... 456 e-127
>gnl|LJGI|DC594030 similar to UniRef100_Q9SQK7 Cluster: EIF4B; n=1; Arabidopsis
thaliana|Rep: EIF4B - Arabidopsis thaliana (Mouse-ear
cress), partial (19%)
Length = 588
Score = 848 bits (428), Expect = 0.0
Identities = 437/439 (99%), Gaps = 1/439 (0%)
Strand = Plus / Plus
Query: 1 atggagcctgaccgtgagaggccaaggttggtgctggatccgcggaagggtgatggttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 atggagcctgaccgtgagaggccaaggttggtgctggatccgcggaagggtgatggttct 210
Query: 61 gtgaatgaaactcctcccgcaatgacgaataagccgagtccgtttggtgctgctaggcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gtgaatgaaactcctcccgcaatgacgaataagccgagtccgtttggtgctgctaggcct 270
Query: 121 agggaggaggtgttggcgcagaagggattggattggaagaagctggattctgaaattgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agggaggaggtgttggcgcagaagggattggattggaagaagctggattctgaaattgag 330
Query: 181 gcgaagaaggctacaagtaggcccacgagttctcactccaccaccagcaggccttccagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gcgaagaaggctacaagtaggcccacgagttctcactccaccaccagcaggccttccagt 390
Query: 241 tctgagggtccagatgctgtgctgaaaccaaggccgaaggtgaacccctttggggaagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tctgagggtccagatgctgtgctgaaaccaaggccgaaggtgaacccctttggggaagcc 450
Query: 301 aaaccaagggaggttttgctcgccgagcgaggtgctgattggcgtaagattgatcttgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aaaccaagggaggttttgctcgccgagcgaggtgctgattggcgtaagattgatcttgaa 510
Query: 361 ttggagcgtcgcggggttgacaggcctgagacggaggaggaaaaattattaaaagaagaa 420
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 511 ttggagcgtcgcggggttgacaggcctgagacggaggagg-aaaattattanaagaagaa 569
Query: 421 attgataatttgaagaagg 439
|||||||||||||||||||
Sbjct: 570 attgataatttgaagaagg 588
>gnl|LJGI|TC71911 weakly similar to UniRef100_Q9M7E8 Cluster: Eukaryotic initiation
factor 4B; n=1; Arabidopsis thaliana|Rep: Eukaryotic
initiation factor 4B - Arabidopsis thaliana (Mouse-ear
cress), partial (14%)
Length = 603
Score = 456 bits (230), Expect = e-127
Identities = 230/230 (100%)
Strand = Plus / Plus
Query: 557 tccatgatttagatgacaaagttcgttttgggcagaaagctgttgataggccaggttcat 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccatgatttagatgacaaagttcgttttgggcagaaagctgttgataggccaggttcat 60
Query: 617 cagcaggaaggactcctgttttatctgataggccgccatctcgctctggctcatttgagg 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagcaggaaggactcctgttttatctgataggccgccatctcgctctggctcatttgagg 120
Query: 677 attccagaagtgtggatttttcagaccgccctcgatcccgcggcacaggagatgcttgga 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attccagaagtgtggatttttcagaccgccctcgatcccgcggcacaggagatgcttgga 180
Query: 737 tgcgtcctagtgacgaccgaagacagtttcaaggtagcagggaacgaggg 786
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcgtcctagtgacgaccgaagacagtttcaaggtagcagggaacgaggg 230