Miyakogusa Predicted Gene

Lj4g3v2728270.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2728270.1 Non Chatacterized Hit- tr|D5ABK4|D5ABK4_PICSI
Putative uncharacterized protein OS=Picea sitchensis P,58.9,2e-19,
,CUFF.51564.1
         (249 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62488 similar to UniRef100_A7PYL1 Cluster: Chromosome...   121   2e-27
gnl|LJGI|TC77494 similar to UniRef100_A7PYL1 Cluster: Chromosome...    72   2e-12
gnl|LJGI|TC70967 similar to UniRef100_A7PYL1 Cluster: Chromosome...    72   2e-12

>gnl|LJGI|TC62488 similar to UniRef100_A7PYL1 Cluster: Chromosome chr12 scaffold_38,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_38, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (82%)
          Length = 828

 Score =  121 bits (61), Expect = 2e-27
 Identities = 139/165 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   ttttgttacctccaatgtacacacattcaacgtattggctctgggcttcaggattttatc 67
           ||||||| |||||||||||||||||||| ||||||||||| |||||| |||| |||||||
Sbjct: 664 ttttgttgcctccaatgtacacacattcgacgtattggctttgggctgcagggttttatc 723

                                                                       
Query: 68  ctctagctatgctgcaagagtctactgatagactgatttatgcatgcacttttcacatgg 127
            |||||||| | ||| |||| ||||||||  | |||| ||    || |||  ||| || |
Sbjct: 724 ttctagctaaggtgctagaggctactgatgaagtgatctacaagtggactcatcatattg 783

                                                        
Query: 128 tcagtggtcacacactcaagcatttgtctgctgcaatggttcctg 172
           ||||||||||||| || |||||||||||||| |||||||||||||
Sbjct: 784 tcagtggtcacacccttaagcatttgtctgcggcaatggttcctg 828


>gnl|LJGI|TC77494 similar to UniRef100_A7PYL1 Cluster: Chromosome chr12 scaffold_38,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_38, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (6%)
          Length = 668

 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 80/94 (85%), Gaps = 3/94 (3%)
 Strand = Plus / Minus

                                                                       
Query: 110 catgcacttttcacatggtcagtggtcacacactcaagcatttgtctgctgcaatggttc 169
           ||||||||||||| ||||||||| |||||||||| ||||||    ||||||||| |||| 
Sbjct: 492 catgcacttttcatatggtcagtagtcacacacttaagcat---actgctgcaacggttt 436

                                             
Query: 170 ctgccatcttaacagtcatgcttgcaaagaggag 203
           ||  ||| |||||  |||||||||||||||||||
Sbjct: 435 ctctcattttaaccctcatgcttgcaaagaggag 402


>gnl|LJGI|TC70967 similar to UniRef100_A7PYL1 Cluster: Chromosome chr12 scaffold_38,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_38, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (10%)
          Length = 556

 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 80/94 (85%), Gaps = 3/94 (3%)
 Strand = Plus / Minus

                                                                       
Query: 110 catgcacttttcacatggtcagtggtcacacactcaagcatttgtctgctgcaatggttc 169
           ||||||||||||| ||||||||| |||||||||| ||||||    ||||||||| |||| 
Sbjct: 416 catgcacttttcatatggtcagtagtcacacacttaagcat---actgctgcaacggttt 360

                                             
Query: 170 ctgccatcttaacagtcatgcttgcaaagaggag 203
           ||  ||| |||||  |||||||||||||||||||
Sbjct: 359 ctctcattttaaccctcatgcttgcaaagaggag 326