Miyakogusa Predicted Gene
- Lj4g3v2717190.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2717190.1 Non Chatacterized Hit- tr|I1KSW0|I1KSW0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,82.18,0,ZF_RING_2,Zinc finger, RING-type; no description,Zinc
finger, RING/FYVE/PHD-type; vWA-like,NULL; RIN,CUFF.51556.1
(1416 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW600112 similar to UniRef100_Q153E2 Cluster: Copine-li... 478 e-134
gnl|LJGI|DC598835 similar to UniRef100_A7PM08 Cluster: Chromosom... 131 1e-29
gnl|LJGI|TC62262 similar to UniRef100_Q08ET6 Cluster: RING-finge... 131 1e-29
gnl|LJGI|TC62168 similar to UniRef100_A7PCN7 Cluster: Chromosome... 74 3e-12
gnl|LJGI|GO026494 similar to UniRef100_A7PM08 Cluster: Chromosom... 72 1e-11
gnl|LJGI|TC78635 similar to UniRef100_A7QST8 Cluster: Chromosome... 70 4e-11
gnl|LJGI|GO031905 similar to UniRef100_A7QST8 Cluster: Chromosom... 68 2e-10
gnl|LJGI|TC82550 similar to UniRef100_Q6YYC5 Cluster: Copine I-l... 60 4e-08
>gnl|LJGI|BW600112 similar to UniRef100_Q153E2 Cluster: Copine-like protein; n=1; Oryza
sativa Japonica Group|Rep: Copine-like protein - Oryza
sativa subsp. japonica (Rice), partial (9%)
Length = 468
Score = 478 bits (241), Expect = e-134
Identities = 309/333 (92%), Gaps = 14/333 (4%)
Strand = Plus / Plus
Query: 1098 gcggaggggacattcaccggaccgtgttcatctacctccacctcgtcatgatagagcttc 1157
||||||||||||||| |||||||||||| ||| ||||||||||| |||||||||| ||
Sbjct: 11 gcggaggggacattcggcggaccgtgttcctctttctccacctcgttatgatagagcatc 70
Query: 1158 atctagcagcgccgaaacatccttccgttcaaacagttttcagcagagtgctcatacata 1217
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ctctagcagcgccgcaacatctttccgttcaaacagttttcagcagagtgctcatacata 130
Query: 1218 tactg-gttacaacaatgaagttagcacagaaccatcttcaggtggcttatatgacaaca 1276
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tactgagttacaacaatgaagttagcacagaaccatcttcaggtggcttatatgacaaca 190
Query: 1277 ag-------------gtttgccctatttgtcttactaatgggaaggatatggcttttggt 1323
|| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 agtggttaaatgcaggtttgccctatttgtcttactaatgggaaggatatggcttttggt 250
Query: 1324 tgcgggcatcagacttgttgtgattgtggagaaagcctcgaatcctgccctatttgccga 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tgcgggcatcagacttgttgtgattgtggagaaagcctcgaatcctgccctatttgccga 310
Query: 1384 agtgctatcaccaccaaaataaggcttttctag 1416
|||||||||||||||||||||||||||||||||
Sbjct: 311 agtgctatcaccaccaaaataaggcttttctag 343
>gnl|LJGI|DC598835 similar to UniRef100_A7PM08 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 563
Score = 131 bits (66), Expect = 1e-29
Identities = 330/418 (78%)
Strand = Plus / Plus
Query: 577 catgatcaagatgtcttcagcttccattcagatgagagtttttgcaatggatttgaggaa 636
|||||||||||||||||||| ||| || ||||||| || ||||||||||||||||| |||
Sbjct: 2 catgatcaagatgtcttcagtttctatccagatgaaagattttgcaatggatttgaagaa 61
Query: 637 gttttgtcaaaatatagagagattgttcctcgtcttcgactagcaggacctacctcattt 696
|| || || || || ||| ||||| | ||||||| ||||| ||||| ||||||
Sbjct: 62 gtgctgagtcggtacagggaaattattcctaatattcgacttgcaggccctacttcattt 121
Query: 697 gcccctatggttgagatggccatgactattgttgagcaaagtggtggccaatatcatgtc 756
|| || || |||| ||||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 122 gcaccaatcattgaaatggccatgacaattgttgagcagagtggaggccaatatcatgtt 181
Query: 757 ttgctaataatcgctgatggacaggttactagaagcgttgacacgcagcgcggccagcta 816
||| | ||| | || ||||| ||||| || ||||| ||||||| | | || ||||
Sbjct: 182 ttggtgatagttgcagatggccaggtaacaagaagtattgacactgaaagtgggaggcta 241
Query: 817 agtccacaggaacagagaacaattgatgcaattgtaaaagccagcgagtatccactgtcg 876
||||||||||| || | || ||||||| ||||| | ||||| | | ||| || ||
Sbjct: 242 agtccacaggagcaaaagactgttgatgctattgttgaggccagtaaatttcctctttca 301
Query: 877 atagttttggtgggagttggagatggaccatgggatatgatgagggagtttgatgataac 936
|| | ||||| || |||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 302 atcatattggttggtgttggagatggaccttgggacatgatgagagagtttgatgataat 361
Query: 937 attccagctcgagcctttgacaattttcagtttgtgaattttacagagataatgtcaa 994
|| || |||| |||||||| ||||| |||||||| ||||| || || || |||||||
Sbjct: 362 atcccctctcgggcctttgataatttccagtttgtaaatttcacggaaattatgtcaa 419
>gnl|LJGI|TC62262 similar to UniRef100_Q08ET6 Cluster: RING-finger protein; n=1;
Capsicum annuum|Rep: RING-finger protein - Capsicum
annuum (Bell pepper), partial (21%)
Length = 808
Score = 131 bits (66), Expect = 1e-29
Identities = 246/306 (80%)
Strand = Plus / Plus
Query: 283 aaaaggaggttagataggagatattcaaggatagctgatgattaccattcactggatgag 342
|||||||||||||| |||| || || || || |||||| ||||| | || | ||||||
Sbjct: 503 aaaaggaggttagagaggaagtactcgagaatcgctgataattacaactccatagatgag 562
Query: 343 gttactgctgctctttcacatgctggcctggaatcttctaatctcattgtgggcattgat 402
|| |||| |||||| ||| ||| ||||| || ||||| ||||| ||| | || ||||||
Sbjct: 563 gtgactgaggctcttgcacgtgcaggccttgagtcttccaatcttattcttggtattgat 622
Query: 403 ttcacaaagagcaacgaatggacagggaagatgtccttcaatcgaaaaagtttacatcac 462
| ||| |||||||| || |||||||| ||| || || || || |||| || ||||||
Sbjct: 623 tgcactaagagcaatgagtggacaggaaagcattcatttaacagacaaagcttgcatcac 682
Query: 463 attggaagtgggcctaatccttatgaacaagcaatcacaattattgggaaaactttaagt 522
||||| | || || ||||| |||||||||||||| | |||||||||||||| | |
Sbjct: 683 attgggaatgttccgaatccatatgaacaagcaatatccattattgggaaaaccatggct 742
Query: 523 gtttttgacgaggataacttgattccttgttttggatttggagatgcatcaacacatgat 582
| ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 743 gcatttgatgaggataacttgattccttgttttggatttggcgatgcatcaacgcatgat 802
Query: 583 caagat 588
||||||
Sbjct: 803 caagat 808
>gnl|LJGI|TC62168 similar to UniRef100_A7PCN7 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (69%)
Length = 907
Score = 73.8 bits (37), Expect = 3e-12
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 526 tttgacgaggataacttgattccttgttttggatttggagatgcatcaacacatgatcaa 585
||||| || |||||||| ||||| |||| ||||||||||||||||||||||||||| ||
Sbjct: 515 tttgatgaagataacttaattccctgttatggatttggagatgcatcaacacatgaccag 574
Query: 586 gatgtcttcagcttccattcagatgagagtttttgcaatggatttgaggaagt 638
|| || || || ||| || | |||||||| ||||| | |||||||| |||||
Sbjct: 575 gaagtttttagtttcaatcccgatgagagattttgtcaaggatttgaagaagt 627
Score = 67.9 bits (34), Expect = 2e-10
Identities = 166/210 (79%)
Strand = Plus / Plus
Query: 709 gagatggccatgactattgttgagcaaagtggtggccaatatcatgtcttgctaataatc 768
|||||||| || || || |||||||||||||| |||||||| ||||||||| | || ||
Sbjct: 698 gagatggcaatcaccatagttgagcaaagtggaggccaataccatgtcttggtgatcata 757
Query: 769 gctgatggacaggttactagaagcgttgacacgcagcgcggccagctaagtccacaggaa 828
|| ||||| ||||| || ||||| |||||||| |||| || ||| | ||| | || |||
Sbjct: 758 gcagatggccaggtgacaagaagtgttgacaccgagcgtgggcagttgagttctcaagaa 817
Query: 829 cagagaacaattgatgcaattgtaaaagccagcgagtatccactgtcgatagttttggtg 888
||| ||| | || || ||||| ||||| || || ||||| ||||| || | || ||
Sbjct: 818 aagaaaactgtagaagctattgtgaaagctagtgaatatcccctgtcaatcatattagtt 877
Query: 889 ggagttggagatggaccatgggatatgatg 918
|||||||| ||||| |||||||||||||||
Sbjct: 878 ggagttggggatgggccatgggatatgatg 907
Score = 65.9 bits (33), Expect = 6e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 352 gctctttcacatgctggcctggaatcttctaatctcattgtgggcattgatttcacaaag 411
|||||| || ||||||| |||| ||||| ||||||||||| || |||||||| ||||||
Sbjct: 341 gctcttgcaaatgctggtttggagtcttccaatctcattgttggtattgattttacaaag 400
Query: 412 agcaacgaatggacagg 428
||||| || ||||||||
Sbjct: 401 agcaatgagtggacagg 417
>gnl|LJGI|GO026494 similar to UniRef100_A7PM08 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 692
Score = 71.9 bits (36), Expect = 1e-11
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 526 tttgacgaggataacttgattccttgttttggatttggagatgcatcaacacatga 581
||||| || |||||||| ||||| |||| |||||||||||||||||||||||||||
Sbjct: 597 tttgatgaagataacttaattccctgttatggatttggagatgcatcaacacatga 652
Score = 65.9 bits (33), Expect = 6e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 352 gctctttcacatgctggcctggaatcttctaatctcattgtgggcattgatttcacaaag 411
|||||| || ||||||| |||| ||||| ||||||||||| || |||||||| ||||||
Sbjct: 423 gctcttgcaaatgctggtttggagtcttccaatctcattgttggtattgattttacaaag 482
Query: 412 agcaacgaatggacagg 428
||||| || ||||||||
Sbjct: 483 agcaatgagtggacagg 499
>gnl|LJGI|TC78635 similar to UniRef100_A7QST8 Cluster: Chromosome chr4 scaffold_162,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_162, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 1554
Score = 69.9 bits (35), Expect = 4e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 881 ttttggtgggagttggagatggaccatgggatatgatgagggagtttgatgataacatt 939
||||||| |||||||||||||||||||||||| ||||| | | |||||||||||||||
Sbjct: 866 ttttggttggagttggagatggaccatgggatgagatgaagaattttgatgataacatt 924
Score = 52.0 bits (26), Expect = 1e-05
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 550 tgttttggatttggagatgcatcaacacatgatcaagatgtcttcagctt 599
|||||||||||||| ||||| || ||||||||||| |||| ||||||||
Sbjct: 535 tgttttggatttggggatgcttctacacatgatcataatgtgttcagctt 584
>gnl|LJGI|GO031905 similar to UniRef100_A7QST8 Cluster: Chromosome chr4 scaffold_162,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_162, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 663
Score = 67.9 bits (34), Expect = 2e-10
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 550 tgttttggatttggagatgcatcaacacatgatcaagatgtcttcagctt 599
|||||||||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 148 tgttttggatttggtgatgcatctacacatgatcagaatgtcttcagctt 197
>gnl|LJGI|TC82550 similar to UniRef100_Q6YYC5 Cluster: Copine I-like protein; n=1;
Oryza sativa Japonica Group|Rep: Copine I-like protein -
Oryza sativa subsp. japonica (Rice), partial (58%)
Length = 1091
Score = 60.0 bits (30), Expect = 4e-08
Identities = 96/118 (81%)
Strand = Plus / Plus
Query: 875 cgatagttttggtgggagttggagatggaccatgggatatgatgagggagtttgatgata 934
|||||||| |||| |||||||| |||||||| ||||| ||||| |||||||||| |
Sbjct: 294 cgatagttctggttggagttggtgatggaccttgggaagacatgagaaagtttgatgaca 353
Query: 935 acattccagctcgagcctttgacaattttcagtttgtgaattttacagagataatgtc 992
| || || || || | | |||||||||||||||||| ||||||||||| || |||||
Sbjct: 354 agataccggcccgtgattatgacaattttcagtttgttaattttacagacatcatgtc 411