Miyakogusa Predicted Gene

Lj4g3v2716980.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2716980.1 Non Chatacterized Hit- tr|I1K4D2|I1K4D2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,79.46,0,seg,NULL;
HYPOTHETICAL MEMBRANE PROTEIN,NULL; FAMILY NOT NAMED,NULL; DOMON,DOMON
domain; CYTOCHROME_,CUFF.51538.1
         (2661 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79249 similar to UniRef100_A7P5X6 Cluster: Chromosome...   147   4e-34
gnl|LJGI|TC77205 weakly similar to UniRef100_A7P5X6 Cluster: Chr...    62   2e-08

>gnl|LJGI|TC79249 similar to UniRef100_A7P5X6 Cluster: Chromosome chr4 scaffold_6,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_6, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (10%)
          Length = 753

 Score =  147 bits (74), Expect = 4e-34
 Identities = 257/318 (80%)
 Strand = Plus / Plus

                                                                        
Query: 2334 tgttggtagatgtgcctttgttgttggcattgctgcactttttagtgggttgaagcatct 2393
            |||||| |||| |||| ||||||| |||||||| || |||||||||||  |||| ||| |
Sbjct: 16   tgttgggagatctgccgttgttgtaggcattgcagctctttttagtggcatgaaacattt 75

                                                                        
Query: 2394 gggagacagatatggtgtggaaaatgtccatagactcaattgggctttggcaacttggtt 2453
             ||  | ||||||| | ||||||||| | || |||||||||||||  |||  | ||||||
Sbjct: 76   agggcagagatatgatttggaaaatgccaatggactcaattgggcaatggtgatttggtt 135

                                                                        
Query: 2454 ctcaattggtttattgtttgttatttatatggaataccatgaaaagcaacgaatcagtcg 2513
            |||| |||||  ||||  |||| ||||| |||||||||| |||| ||| ||||| ||   
Sbjct: 136  ctcagttggtgcattgactgttgtttatttggaataccaggaaaggcagcgaataaggga 195

                                                                        
Query: 2514 ccgggtatttggaagaagcaattgggttcttggtaatcttgaggaggatgattctgttga 2573
            ||||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||  ||||
Sbjct: 196  ccggggatttggaagaagcaattgggtacttggtaatgttgaggatgatgattcccttga 255

                                                                        
Query: 2574 tctcttgactgcaaacacaacacctgcagatagagagtcacaatcttctgtgagaatgga 2633
            ||||||||   | | ||  | |||||   ||| |||||| ||| | ||||  ||||||||
Sbjct: 256  tctcttgagcccgaccaggatacctgtgcataaagagtcccaagcctctgccagaatgga 315

                              
Query: 2634 agtccagttagaaccttt 2651
            ||||||||||||||||||
Sbjct: 316  agtccagttagaaccttt 333


>gnl|LJGI|TC77205 weakly similar to UniRef100_A7P5X6 Cluster: Chromosome chr4
           scaffold_6, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (11%)
          Length = 609

 Score = 61.9 bits (31), Expect = 2e-08
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 159 cgacgattgctcctttagggtttctcacttcgacatgcttcctggctccga 209
           |||||||||||| ||||||||||| || |||||||||||  ||||||||||
Sbjct: 403 cgacgattgctcgtttagggtttcccaattcgacatgctctctggctccga 453