Miyakogusa Predicted Gene
- Lj4g3v2704750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2704750.1 Non Chatacterized Hit- tr|I1LLK2|I1LLK2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.75,0,seg,NULL;
Putative lipopolysaccharide-modifying
enzyme,Lipopolysaccharide-modifying protein;
UNCHARA,NODE_48140_length_1170_cov_64.211113.path2.1
(963 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78779 similar to UniRef100_A7NYF2 Cluster: Chromosome... 823 0.0
gnl|LJGI|TC75954 weakly similar to UniRef100_Q0DKQ1 Cluster: Os0... 640 0.0
gnl|LJGI|AV411673 similar to UniRef100_A7NYF2 Cluster: Chromosom... 377 e-104
gnl|LJGI|TC71387 similar to UniRef100_A7PZA5 Cluster: Chromosome... 52 7e-06
>gnl|LJGI|TC78779 similar to UniRef100_A7NYF2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 498
Score = 823 bits (415), Expect = 0.0
Identities = 415/415 (100%)
Strand = Plus / Plus
Query: 243 gtcagagataaatatacgtccatggcaggaggagttcccggatatcaagcgaggttctca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 gtcagagataaatatacgtccatggcaggaggagttcccggatatcaagcgaggttctca 143
Query: 303 agctgtgagttggaaaaataagatggcatgggcatactggagaggaaacccagatgttgc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 agctgtgagttggaaaaataagatggcatgggcatactggagaggaaacccagatgttgc 203
Query: 363 atctccgattcgtgttgaattactaaattgtaatgatactaggatgtggggagcacaaat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 atctccgattcgtgttgaattactaaattgtaatgatactaggatgtggggagcacaaat 263
Query: 423 tatgcgtcaggattggggtgaagctgcaagaagtggctttaaggagtctaaactttcaaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatgcgtcaggattggggtgaagctgcaagaagtggctttaaggagtctaaactttcaaa 323
Query: 483 acagtgtaatcaccggtataagatttatgctgaagggtatgcatggtctgtgagtttaaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acagtgtaatcaccggtataagatttatgctgaagggtatgcatggtctgtgagtttaaa 383
Query: 543 atatattctctcgtgtggttccgttacgctaattatatcaccctcccagtatgaagattt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atatattctctcgtgtggttccgttacgctaattatatcaccctcccagtatgaagattt 443
Query: 603 tttcactcgaggccttattccaagacaaaactcttggcctgttgatcctctaaat 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttcactcgaggccttattccaagacaaaactcttggcctgttgatcctctaaat 498
>gnl|LJGI|TC75954 weakly similar to UniRef100_Q0DKQ1 Cluster: Os05g0149500 protein;
n=1; Oryza sativa Japonica Group|Rep: Os05g0149500
protein - Oryza sativa subsp. japonica (Rice), partial
(19%)
Length = 554
Score = 640 bits (323), Expect = 0.0
Identities = 323/323 (100%)
Strand = Plus / Plus
Query: 641 ctgttgatcctctaaatctatgtccatctataaagaatgctgtcgactggggaaaccaac 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgttgatcctctaaatctatgtccatctataaagaatgctgtcgactggggaaaccaac 60
Query: 701 acccacgagaggccgaggctataggtaaaagggggcaggattttatggaaagcttgagca 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acccacgagaggccgaggctataggtaaaagggggcaggattttatggaaagcttgagca 120
Query: 761 tggatcgaatttatgattacatgttgcaccttatatcggaatacgcaaaactacaggact 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggatcgaatttatgattacatgttgcaccttatatcggaatacgcaaaactacaggact 180
Query: 821 tcaagccttctccacccccgaccgccctggaagtctgctcagaatcggtgctttgctttg 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaagccttctccacccccgaccgccctggaagtctgctcagaatcggtgctttgctttg 240
Query: 881 ctgatgacaagcagaggatgttcctgagcaagtcaactacctccccttcacaaacccctc 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgatgacaagcagaggatgttcctgagcaagtcaactacctccccttcacaaacccctc 300
Query: 941 cttgcactctcaaacctgcctag 963
|||||||||||||||||||||||
Sbjct: 301 cttgcactctcaaacctgcctag 323
>gnl|LJGI|AV411673 similar to UniRef100_A7NYF2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 262
Score = 377 bits (190), Expect = e-104
Identities = 190/190 (100%)
Strand = Plus / Plus
Query: 1 atgtttgtggattggtactatgcttgtgtgcagagcagagccatgttcacggtttggggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atgtttgtggattggtactatgcttgtgtgcagagcagagccatgttcacggtttggggg 132
Query: 61 attttgcagcttctgaggaagtaccctgggttggtgcctgatgtggatttgatgtttgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 attttgcagcttctgaggaagtaccctgggttggtgcctgatgtggatttgatgtttgat 192
Query: 121 tgcatggataagcctactatcaacagaactgaacacctgtcaatgccattgccactgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tgcatggataagcctactatcaacagaactgaacacctgtcaatgccattgccactgttt 252
Query: 181 cgatattgca 190
||||||||||
Sbjct: 253 cgatattgca 262
>gnl|LJGI|TC71387 similar to UniRef100_A7PZA5 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (85%)
Length = 1931
Score = 52.0 bits (26), Expect = 7e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 217 ttccctgattggtctttctggggttggtcagagataaatata 258
||||||||||||||||||||||| ||| | ||||| ||||||
Sbjct: 877 ttccctgattggtctttctgggggtgggcggagattaatata 918