Miyakogusa Predicted Gene
- Lj4g3v2704660.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2704660.1 Non Chatacterized Hit- tr|I3SSW3|I3SSW3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=3
SV=1,97.8,1.4013e-45,Ribosomal_L7Ae,Ribosomal protein
L7Ae/L30e/S12e/Gadd45; RIBOSOMAL_L30E_1,Ribosomal protein L30e,
con,CUFF.51514.1
(279 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67369 homologue to UniRef100_O49884 Cluster: 60S ribo... 545 e-155
gnl|LJGI|TC64361 UniRef100_O49884 Cluster: 60S ribosomal protein... 379 e-105
gnl|LJGI|TC67715 homologue to UniRef100_O49884 Cluster: 60S ribo... 339 5e-93
gnl|LJGI|GO025342 homologue to UniRef100_O49884 Cluster: 60S rib... 274 3e-73
gnl|LJGI|TC67791 homologue to UniRef100_O49884 Cluster: 60S ribo... 274 3e-73
gnl|LJGI|GO024153 homologue to UniRef100_O49884 Cluster: 60S rib... 105 1e-22
gnl|LJGI|TC81902 homologue to UniRef100_A7X6P5 Cluster: Ribosoma... 82 2e-15
>gnl|LJGI|TC67369 homologue to UniRef100_O49884 Cluster: 60S ribosomal protein L30;
n=1; Lupinus luteus|Rep: 60S ribosomal protein L30 -
Lupinus luteus (European yellow lupin), complete
Length = 597
Score = 545 bits (275), Expect = e-155
Identities = 278/279 (99%)
Strand = Plus / Plus
Query: 1 atgaagagtggcaaattcactctcggctacaaaaccgttctcaaatccctaaggagctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atgaagagtggcaaattcactctcggctacaaaaccgttctcaaatccctaaggagctcc 199
Query: 61 aaagggaaactgattatcattgctaacaactgtccccctttgagaaagtcagagatagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aaagggaaactgattatcattgctaacaactgtccccctttgagaaagtcagagatagag 259
Query: 121 tattatgccatgttagcaaaggttggagttcatcattacaatgggaataatgttgatctg 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tattatgccatgttggcaaaggttggagttcatcattacaatgggaataatgttgatctg 319
Query: 181 ggcactgcttgcggcaaatactacagagtgtgctgcctcagcattatcgatcctggtgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggcactgcttgcggcaaatactacagagtgtgctgcctcagcattatcgatcctggtgac 379
Query: 241 tcagatatcattaaaacactgcctggtgaccagtaaagc 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcagatatcattaaaacactgcctggtgaccagtaaagc 418
>gnl|LJGI|TC64361 UniRef100_O49884 Cluster: 60S ribosomal protein L30; n=1; Lupinus
luteus|Rep: 60S ribosomal protein L30 - Lupinus luteus
(European yellow lupin), complete
Length = 653
Score = 379 bits (191), Expect = e-105
Identities = 257/279 (92%)
Strand = Plus / Plus
Query: 1 atgaagagtggcaaattcactctcggctacaaaaccgttctcaaatccctaaggagctcc 60
|||||||| ||||||| || ||||| || || ||||||||||||||||| |||||||||
Sbjct: 141 atgaagagcggcaaatataccctcgggtataagaccgttctcaaatccctcaggagctcc 200
Query: 61 aaagggaaactgattatcattgctaacaactgtccccctttgagaaagtcagagatagag 120
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 201 aaagggaaactgattatcattgctaacaactgtcctcctttgaggaagtctgagatagag 260
Query: 121 tattatgccatgttagcaaaggttggagttcatcattacaatgggaataatgttgatctg 180
|| ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 tactatgccatgttggcgaaggttggagttcatcattacaatgggaacaatgttgatctt 320
Query: 181 ggcactgcttgcggcaaatactacagagtgtgctgcctcagcattatcgatcctggtgac 240
|||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 ggcactgcctgcggaaaatactacagagtgtgctgcctcagcattattgatcctggtgac 380
Query: 241 tcagatatcattaaaacactgcctggtgaccagtaaagc 279
||||||||||| || ||| ||||||||||||||||||||
Sbjct: 381 tcagatatcatcaagacattgcctggtgaccagtaaagc 419
>gnl|LJGI|TC67715 homologue to UniRef100_O49884 Cluster: 60S ribosomal protein L30;
n=1; Lupinus luteus|Rep: 60S ribosomal protein L30 -
Lupinus luteus (European yellow lupin), complete
Length = 667
Score = 339 bits (171), Expect = 5e-93
Identities = 252/279 (90%)
Strand = Plus / Plus
Query: 1 atgaagagtggcaaattcactctcggctacaaaaccgttctcaaatccctaaggagctcc 60
|||||||||||||||| ||||| || |||||||| ||||||||||| || || || |||
Sbjct: 112 atgaagagtggcaaatatactctaggttacaaaactgttctcaaatcactgagaagttcc 171
Query: 61 aaagggaaactgattatcattgctaacaactgtccccctttgagaaagtcagagatagag 120
||||||||||||||||||||||| ||||| || || |||||||| ||||||||||| |||
Sbjct: 172 aaagggaaactgattatcattgccaacaattgcccacctttgaggaagtcagagattgag 231
Query: 121 tattatgccatgttagcaaaggttggagttcatcattacaatgggaataatgttgatctg 180
|||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 232 tattatgctatgttggcaaaggttggagttcatcactacaatgggaacaatgttgatctg 291
Query: 181 ggcactgcttgcggcaaatactacagagtgtgctgcctcagcattatcgatcctggtgac 240
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ggcactgcatgcggcaaatactacagagtgtgctgcctcagcattatcgatcctggtgat 351
Query: 241 tcagatatcattaaaacactgcctggtgaccagtaaagc 279
|| |||||||| || ||| |||| ||||||||||||||
Sbjct: 352 tctgatatcataaagacattgcccagtgaccagtaaagc 390
>gnl|LJGI|GO025342 homologue to UniRef100_O49884 Cluster: 60S ribosomal protein L30;
n=1; Lupinus luteus|Rep: 60S ribosomal protein L30 -
Lupinus luteus (European yellow lupin), complete
Length = 514
Score = 274 bits (138), Expect = 3e-73
Identities = 243/278 (87%)
Strand = Plus / Plus
Query: 1 atgaagagtggcaaattcactctcggctacaaaaccgttctcaaatccctaaggagctcc 60
||||||||||||||||||||| | || |||||||| |||||||||||||| || ||||||
Sbjct: 189 atgaagagtggcaaattcactttgggttacaaaacggttctcaaatccctcagaagctcc 248
Query: 61 aaagggaaactgattatcattgctaacaactgtccccctttgagaaagtcagagatagag 120
|||||||||||||| |||||||| ||||| || || || ||||| ||||| || || |||
Sbjct: 249 aaagggaaactgatcatcattgccaacaattgcccaccgttgaggaagtctgaaattgag 308
Query: 121 tattatgccatgttagcaaaggttggagttcatcattacaatgggaataatgttgatctg 180
|| ||||| ||||| || ||||| |||||||||||||| ||||| |||||||| ||| ||
Sbjct: 309 tactatgctatgttggcgaaggtcggagttcatcattataatggaaataatgtggatttg 368
Query: 181 ggcactgcttgcggcaaatactacagagtgtgctgcctcagcattatcgatcctggtgac 240
||||||||||||||||| || ||||||||||||||||| ||||| || |||||||||||
Sbjct: 369 ggcactgcttgcggcaagtattacagagtgtgctgcctgagcatcattgatcctggtgat 428
Query: 241 tcagatatcattaaaacactgcctggtgaccagtaaag 278
|| ||||| ||||||||| ||||||| |||||||||||
Sbjct: 429 tcggatattattaaaacattgcctggcgaccagtaaag 466
>gnl|LJGI|TC67791 homologue to UniRef100_O49884 Cluster: 60S ribosomal protein L30;
n=1; Lupinus luteus|Rep: 60S ribosomal protein L30 -
Lupinus luteus (European yellow lupin), complete
Length = 590
Score = 274 bits (138), Expect = 3e-73
Identities = 243/278 (87%)
Strand = Plus / Plus
Query: 1 atgaagagtggcaaattcactctcggctacaaaaccgttctcaaatccctaaggagctcc 60
||||||||||||||||||||| | || |||||||| |||||||||||||| || ||||||
Sbjct: 143 atgaagagtggcaaattcactttgggttacaaaacggttctcaaatccctcagaagctcc 202
Query: 61 aaagggaaactgattatcattgctaacaactgtccccctttgagaaagtcagagatagag 120
|||||||||||||| |||||||| ||||| || || || ||||| ||||| || || |||
Sbjct: 203 aaagggaaactgatcatcattgccaacaattgcccaccgttgaggaagtctgaaattgag 262
Query: 121 tattatgccatgttagcaaaggttggagttcatcattacaatgggaataatgttgatctg 180
|| ||||| ||||| || ||||| |||||||||||||| ||||| |||||||| ||| ||
Sbjct: 263 tactatgctatgttggcgaaggtcggagttcatcattataatggaaataatgtggatttg 322
Query: 181 ggcactgcttgcggcaaatactacagagtgtgctgcctcagcattatcgatcctggtgac 240
||||||||||||||||| || ||||||||||||||||| ||||| || |||||||||||
Sbjct: 323 ggcactgcttgcggcaagtattacagagtgtgctgcctgagcatcattgatcctggtgat 382
Query: 241 tcagatatcattaaaacactgcctggtgaccagtaaag 278
|| ||||| ||||||||| ||||||| |||||||||||
Sbjct: 383 tcggatattattaaaacattgcctggcgaccagtaaag 420
>gnl|LJGI|GO024153 homologue to UniRef100_O49884 Cluster: 60S ribosomal protein L30;
n=1; Lupinus luteus|Rep: 60S ribosomal protein L30 -
Lupinus luteus (European yellow lupin), partial (30%)
Length = 725
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 169 aatgttgatctgggcactgcttgcggcaaatactacagagtgtgctgcctcagcattatc 228
||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 475 aatgttgatcttggcactgcctgcggaaaatactacagagtgtgctgcctcagcattatt 534
Query: 229 gatcctggt 237
|||||||||
Sbjct: 535 gatcctggt 543
>gnl|LJGI|TC81902 homologue to UniRef100_A7X6P5 Cluster: Ribosomal protein L30e; n=1;
Pisum sativum|Rep: Ribosomal protein L30e - Pisum
sativum (Garden pea), partial (38%)
Length = 778
Score = 81.8 bits (41), Expect = 2e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 1 atgaagagtggcaaattcactctcggctacaaaaccgttctcaaatccctaaggagctcc 60
||||||||||||||||||||| | || |||||||| |||||||||||||| || ||||||
Sbjct: 202 atgaagagtggcaaattcactttgggttacaaaacggttctcaaatccctcagaagctcc 143
Query: 61 aaagg 65
|||||
Sbjct: 142 aaagg 138