Miyakogusa Predicted Gene

Lj4g3v2693610.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2693610.1 Non Chatacterized Hit- tr|G5AGE6|G5AGE6_PHYSP
Putative uncharacterized protein OS=Phytophthora
sojae,26.85,2e-18,Nuf2,Kinetochore protein Nuf2; KINETOCHORE PROTEIN
NUF2,NULL; MEMBRALIN/KINETOCHORE PROTEIN NUF2,NUL,CUFF.51521.1
         (993 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80142 weakly similar to UniRef100_A7P645 Cluster: Chr...   696   0.0  

>gnl|LJGI|TC80142 weakly similar to UniRef100_A7P645 Cluster: Chromosome chr4
           scaffold_6, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (13%)
          Length = 427

 Score =  696 bits (351), Expect = 0.0
 Identities = 412/427 (96%), Gaps = 4/427 (0%)
 Strand = Plus / Minus

                                                                       
Query: 173 aagataacgagcaactcaacttcgatgatctggagcagctcgagaaccccgatctccatg 232
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aagataacgagcaactcaacttcgatgatctggagcagctcgagaaccccgatctccatg 368

                                                                       
Query: 233 tggaatcagtccgcgcaatcaagctctatacgaagattaaggaacttctcgacgcgcttg 292
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tggaatcagtccgcgcaatcaagctctatacgaagattaaggaacttctcgacgcgcttg 308

                                                                       
Query: 293 agtgccctaggaaattcacctttgctgatcttctcatgccggaaccacagaaaaccgagt 352
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 307 agtgccctaggaaattcaccttggctgatcttctcatgccggaaccacagaaaaccgagt 248

                                                                       
Query: 353 tcttcctcgg-cgctcttctcaatttctgcctcgacagggattcgcgaatgaattcga-t 410
           |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 247 tcttcctcggacgctctactcaatttctgcctcgacagggattcgcgaatgaattcgact 188

                                                                       
Query: 411 atcagaaattgttgatgagttcaatgctttggagatgcagcggacggagttggaggagaa 470
           ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 187 atcagaaatggttgatgagttcaatgcttcggagatgcagcggacggagttggaggagaa 128

                                                                       
Query: 471 tagaattttgcagttgaaagcagaaatttctgaatgcaatgaagcgaggg-agagagaga 529
           ||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 127 tagaatcaggcagttgaaagcagaaatttctgaatgcaatgaagcgagggcagagagaga 68

                                                                       
Query: 530 tgcctct-tgttcaggaggttgatgcgaaggttagagagcttcgtcaaactatcggggca 588
           |||||||  || |||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 67  tgcctctcggtacaggaggtcgatgcgaaggttacagagcttcgtcaaactatcggggca 8

                  
Query: 589 ctgaatc 595
           |||||||
Sbjct: 7   ctgaatc 1