Miyakogusa Predicted Gene

Lj4g3v2693570.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2693570.1 CUFF.51501.1
         (1224 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65531 weakly similar to UniRef100_A7PYK8 Cluster: Chr...    60   3e-08
gnl|LJGI|TC62012 weakly similar to UniRef100_A7PYK6 Cluster: Chr...    60   3e-08

>gnl|LJGI|TC65531 weakly similar to UniRef100_A7PYK8 Cluster: Chromosome chr12
           scaffold_38, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_38, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (20%)
          Length = 820

 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 90/110 (81%)
 Strand = Plus / Plus

                                                                       
Query: 301 tcatgccttcaagacttccaattcaaactcaattccctctcacttcccaaaacccttgct 360
           |||||| ||||||| ||||||  ||| |||| | | || ||||| ||||| | |||||||
Sbjct: 587 tcatgcattcaagatttccaagccaagctcagtgctctgtcactccccaataaccttgct 646

                                                             
Query: 361 tcctcctgctttgacccacttcaatttgtcatcactcccaacatctgtgc 410
              |||||||||||||| ||||| ||||| ||| | ||||||||||||||
Sbjct: 647 agttcctgctttgaccctcttcagtttgttatctcccccaacatctgtgc 696


>gnl|LJGI|TC62012 weakly similar to UniRef100_A7PYK6 Cluster: Chromosome chr12
           scaffold_38, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_38, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (36%)
          Length = 1114

 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 90/110 (81%)
 Strand = Plus / Plus

                                                                       
Query: 301 tcatgccttcaagacttccaattcaaactcaattccctctcacttcccaaaacccttgct 360
           |||||| ||||||| ||||||  ||| |||| | | || ||||| ||||| | |||||||
Sbjct: 420 tcatgcattcaagatttccaagccaagctcagtgctctgtcactccccaataaccttgct 479

                                                             
Query: 361 tcctcctgctttgacccacttcaatttgtcatcactcccaacatctgtgc 410
              |||||||||||||| ||||| ||||| ||| | ||||||||||||||
Sbjct: 480 agttcctgctttgaccctcttcagtttgttatctcccccaacatctgtgc 529