Miyakogusa Predicted Gene
- Lj4g3v2692470.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2692470.1 tr|G7IPE1|G7IPE1_MEDTR Serine
hydroxymethyltransferase OS=Medicago truncatula GN=MTR_2g006570 PE=3
S,90.28,0,no description,Pyridoxal phosphate-dependent transferase,
major region, subdomain 1; no
description,,NODE_31526_length_2364_cov_86.197548.path1.1
(1263 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64005 similar to UniRef100_A9PL07 Cluster: Serine hyd... 464 e-130
gnl|LJGI|FS339145 similar to UniRef100_A9PL07 Cluster: Serine hy... 90 4e-17
>gnl|LJGI|TC64005 similar to UniRef100_A9PL07 Cluster: Serine hydroxymethyltransferase;
n=1; Populus tremuloides|Rep: Serine
hydroxymethyltransferase - Populus tremuloides (Quaking
aspen), partial (13%)
Length = 881
Score = 464 bits (234), Expect = e-130
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 1030 ggaggtgtaagaataggtacgcctgccatgacttcaagagggtgtctggagcctgatttt 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggaggtgtaagaataggtacgcctgccatgacttcaagagggtgtctggagcctgatttt 61
Query: 1090 gagaccatggctgaatttctctttagagctgtacaaattgcgagtaagcaaagggagcat 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gagaccatggctgaatttctctttagagctgtacaaattgcgagtaagcaaagggagcat 121
Query: 1150 ggtaaattccagagtttgaagggacttgaaagcaatagggacattcttgagctacggtca 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggtaaattccagagtttgaagggacttgaaagcaatagggacattcttgagctacggtca 181
Query: 1210 cgggttgaaagttttgcaactcagtttgcaatgccaggttttgacatttgagca 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cgggttgaaagttttgcaactcagtttgcaatgccaggttttgacatttgagca 235
>gnl|LJGI|FS339145 similar to UniRef100_A9PL07 Cluster: Serine
hydroxymethyltransferase; n=1; Populus tremuloides|Rep:
Serine hydroxymethyltransferase - Populus tremuloides
(Quaking aspen), partial (44%)
Length = 749
Score = 89.7 bits (45), Expect = 4e-17
Identities = 222/281 (79%)
Strand = Plus / Plus
Query: 334 tacaaggtgaaccctcaatcagggtatgttgattatgataaacttgaggaaagggccctt 393
|||||||| || |||||| | |||||| | |||||||| || |||||||||| || |
Sbjct: 100 tacaaggttaatcctcaaactgggtatatagattatgacaagcttgaggaaaaagctgtg 159
Query: 394 gattttcgtcccaagatactcatttgtggtgggagctcgtatccccgcgaatgggattac 453
|||||||| || |||||||| ||||||||||| || || ||||| | || ||||||||
Sbjct: 160 gattttcgacctaagatacttatttgtggtggaagttcttatcctagagagtgggattat 219
Query: 454 gctaggtttaggcacattgctgataaatgtggtgctgttttattgtgtgacatggcccag 513
| ||||| ||||| |||||||||||||| || || || || ||||||||||||| ||
Sbjct: 220 gggaggttcaggcagattgctgataaatgcggggcggtgttgatgtgtgacatggctcat 279
Query: 514 attagtggcctaattgctgccaaggagtgttcaagcccctttgattattgtgatgttgtt 573
|| ||||| || | || || ||||| | || || ||| |||| |||||| |||||
Sbjct: 280 atcagtggtcttgtggcagctaaggaaggagttagtccatttaattactgtgatattgtt 339
Query: 574 acttcaacaactcacaagagtcttcgaggtcctaggggagg 614
||||||||||| ||||| ||||| || ||||| ||||||||
Sbjct: 340 acttcaacaacccacaaaagtctccggggtccaaggggagg 380
Score = 85.7 bits (43), Expect = 6e-16
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 730 tcattgcaaggtggtccgcacaataaccatattgctgcacttgctatagcattaaaacaa 789
||||| |||||||| || |||||||| || |||||||| ||||| ||| | || ||||||
Sbjct: 493 tcattacaaggtggaccccacaataatcacattgctgctcttgccatatctttcaaacaa 552
Query: 790 gtggctactcccgaatataaggcatacatgcagcaggtgaagaagaatgctcaagcttta 849
|| || ||||| || || || ||||| ||||||||||||||||| ||||| || || |||
Sbjct: 553 gttgcaactccagagtacaaagcatatatgcagcaggtgaagaaaaatgcacaggcatta 612
Query: 850 gcaactgcctt 860
||| |||||||
Sbjct: 613 gcatctgcctt 623