Miyakogusa Predicted Gene

Lj4g3v2666370.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2666370.1 tr|E2BZ02|E2BZ02_HARSA Nucleoporin Ndc1
OS=Harpegnathos saltator GN=EAI_15041 PE=4
SV=1,39.06,3.7,seg,NULL,CUFF.51497.1
         (282 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81893 weakly similar to UniRef100_A7P0A8 Cluster: Chr...   511   e-145

>gnl|LJGI|TC81893 weakly similar to UniRef100_A7P0A8 Cluster: Chromosome chr6
           scaffold_3, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (30%)
          Length = 1044

 Score =  511 bits (258), Expect = e-145
 Identities = 274/282 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggcaaatgtggagacggcggcaacggaggagaagctccataaaccacgcaccctcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 atggggcaaatgtggagacggcggcaacggaggagaagctccataaaccacgcaccctcc 198

                                                                       
Query: 61  acctgtctcgctgccgccgccggtgaaaccctctctttccttggtgtaattctaatccac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 acctgtctcgctgccgccgccggtgaaaccctctctttccttggtgtaattctaatccac 258

                                                                       
Query: 121 tttttcagttcacttggagagacgtatacgcatcaaacttggataatgtttacttcctca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tttttcagttcacttggagagacgtatacgcatcaaacttggataatgtttacttcctca 318

                                                                       
Query: 181 aggttggagatatacaatattcaaattaacttaatgcttgaggttctaacatgtgtaact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aggttggagatatacaatattcaaattaacttaatgcttgaggttctaacatgtgtaact 378

                                                     
Query: 241 tttttnnnnnnnntcaatttattcttcgcattaaatattctg 282
           |||||        |||||||||||||||||||||||||||||
Sbjct: 379 tttttaaaaaaaatcaatttattcttcgcattaaatattctg 420