Miyakogusa Predicted Gene
- Lj4g3v2644180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2644180.1 tr|I1KSL6|I1KSL6_SOYBN T-complex protein 1
subunit alpha OS=Glycine max PE=3 SV=1,93.58,0,TCOMPLEXTCP1,Chaperone,
tailless complex polypeptide 1; chap_CCT_alpha: T-complex protein 1,
alpha s,CUFF.51425.1
(1638 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59086 homologue to UniRef100_A5B8L4 Cluster: T-comple... 1427 0.0
gnl|LJGI|TC64878 homologue to UniRef100_A7PKF9 Cluster: T-comple... 1076 0.0
gnl|LJGI|TC76123 weakly similar to UniRef100_Q3VKT8 Cluster: TRN... 96 8e-19
>gnl|LJGI|TC59086 homologue to UniRef100_A5B8L4 Cluster: T-complex protein 1, alpha
subunit; n=1; Vitis vinifera|Rep: T-complex protein 1,
alpha subunit - Vitis vinifera (Grape), partial (78%)
Length = 801
Score = 1427 bits (720), Expect = 0.0
Identities = 723/724 (99%)
Strand = Plus / Plus
Query: 1 atggcggtgaacacgcaaacccctgacatctccggcgagcgacaatccggccaggacgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atggcggtgaacacgcaaacccctgacatctccggcgagcgacaatccggccaggacgtt 137
Query: 61 cgcacccaaaacgtggtggcgtgccaagccgtcgctaacatcgtcaaaacctcactaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 cgcacccaaaacgtggtggcgtgccaagccgtcgctaacatcgtcaaaacctcactaggc 197
Query: 121 cccgttggccttgacaagatgcttgttgatgatatcggcgatgtcaccatcactaacgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 cccgttggccttgacaagatgcttgttgatgatatcggcgatgtcaccatcactaacgac 257
Query: 181 ggcgctaccatactcaggatgttggaggttgagcatcccgccgctaaggttttggtggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ggcgctaccatactcaggatgttggaggttgagcatcccgccgctaaggttttggtggaa 317
Query: 241 ttggctgagcttcaggacagggaggttggagatggcaccacttcagttgttattgtagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttggctgagcttcaggacagggaggttggagatggcaccacttcagttgttattgtagct 377
Query: 301 gctgagcttctcaaaagagcaaatgaccttgtgaggaataagatccatccaacctcaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gctgagcttctcaaaagagcaaatgaccttgtgaggaataagatccatccaacctcaatt 437
Query: 361 atcagtggatatagacttgcgatgcgcgaagcttgtaaatacattgatgaaaaacttgct 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 438 atcagtggatatagacttgcgatgcgagaagcttgtaaatacattgatgaaaaacttgct 497
Query: 421 gtcaaggttgataaactgggaaaggattcacttgtaaactgtgccaagaccagcatgtcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gtcaaggttgataaactgggaaaggattcacttgtaaactgtgccaagaccagcatgtcc 557
Query: 481 tcaaagttgatagctggtgacagtgacttctttgccaatatggttgtagatgcagtgcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tcaaagttgatagctggtgacagtgacttctttgccaatatggttgtagatgcagtgcag 617
Query: 541 gctgtaaagatgaccaatgctcggggtgaagttaaatacccaattaagggaatcaatata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gctgtaaagatgaccaatgctcggggtgaagttaaatacccaattaagggaatcaatata 677
Query: 601 ttgaaggctcatggaaaaagtgctagagacagctttctgatgaatggttatgctctaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ttgaaggctcatggaaaaagtgctagagacagctttctgatgaatggttatgctctaaat 737
Query: 661 actggccgtgctgctcaaggaatgcctcttagggttgcccctgcaaaaattgcttgtctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 actggccgtgctgctcaaggaatgcctcttagggttgcccctgcaaaaattgcttgtctt 797
Query: 721 gatt 724
||||
Sbjct: 798 gatt 801
>gnl|LJGI|TC64878 homologue to UniRef100_A7PKF9 Cluster: T-complex protein 1, alpha
subunit; n=1; Vitis vinifera|Rep: T-complex protein 1,
alpha subunit - Vitis vinifera (Grape), partial (33%)
Length = 1117
Score = 1076 bits (543), Expect = 0.0
Identities = 543/543 (100%)
Strand = Plus / Plus
Query: 1096 atgatcaaagggaccaaaacttcgggtgcagtttcattggttctcagaggtgcaaatgac 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atgatcaaagggaccaaaacttcgggtgcagtttcattggttctcagaggtgcaaatgac 63
Query: 1156 tatatgctagatgagatggacagagctctgcatgatgcgttatcaattgttaagagaact 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tatatgctagatgagatggacagagctctgcatgatgcgttatcaattgttaagagaact 123
Query: 1216 ctagaatcaaatacggttgtagctggtggaggtgctgttgaatcagcattgtcagtttat 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ctagaatcaaatacggttgtagctggtggaggtgctgttgaatcagcattgtcagtttat 183
Query: 1276 ttggagtaccttgctacaactttaggatcccgggagcagttggctatagcagagtttgct 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ttggagtaccttgctacaactttaggatcccgggagcagttggctatagcagagtttgct 243
Query: 1336 gagtctttgttaatcattccaaaggtgctttctgtcaatgctgctaaggatgctactgag 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gagtctttgttaatcattccaaaggtgctttctgtcaatgctgctaaggatgctactgag 303
Query: 1396 ctggttgcaaaattacgggcctaccaccactcagcacaaactaaagctgataagaaacat 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ctggttgcaaaattacgggcctaccaccactcagcacaaactaaagctgataagaaacat 363
Query: 1456 ttatcaagcatgggcttggatctttcagaaggaaaaattagaaacaacttggaggctgga 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttatcaagcatgggcttggatctttcagaaggaaaaattagaaacaacttggaggctgga 423
Query: 1516 gtcattgagcctgcaatgagcaaagtcaagattattcagtttgctactgaagctgctatt 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gtcattgagcctgcaatgagcaaagtcaagattattcagtttgctactgaagctgctatt 483
Query: 1576 actatccttcgaattgatgacatgatcaagcttgtcaaggatgatggtcaagaagaggat 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 actatccttcgaattgatgacatgatcaagcttgtcaaggatgatggtcaagaagaggat 543
Query: 1636 tag 1638
|||
Sbjct: 544 tag 546
>gnl|LJGI|TC76123 weakly similar to UniRef100_Q3VKT8 Cluster: TRNA
(Uracil-5-)-methyltransferase/TrmA; n=1; Pelodictyon
phaeoclathratiforme BU-1|Rep: TRNA
(Uracil-5-)-methyltransferase/TrmA - Pelodictyon
phaeoclathratiforme BU-1, partial (4%)
Length = 1261
Score = 95.6 bits (48), Expect = 8e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 1419 ccaccactcagcacaaactaaagctgataagaaacatttatcaagcatgggcttggatct 1478
|||||| |||| |||| |||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 495 ccaccattcagaacaatctaaagctgataaggaacatttatcaagcatgggtttggatca 554
Query: 1479 ttcagaaggaaaaatt 1494
||| ||||||||||||
Sbjct: 555 ttctgaaggaaaaatt 570