Miyakogusa Predicted Gene

Lj4g3v2641090.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2641090.1 tr|G7L825|G7L825_MEDTR Potassium transporter
OS=Medicago truncatula GN=MTR_8g088200 PE=4 SV=1,76.77,0,kup:
potassium uptake protein,K+ potassium transporter; K_trans,K+
potassium transporter; seg,NULL; ,CUFF.51417.1
         (2496 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC600138 similar to UniRef100_A7P334 Cluster: Chromosom...    58   3e-07
gnl|LJGI|GO035471 similar to UniRef100_A7P334 Cluster: Chromosom...    56   1e-06

>gnl|LJGI|DC600138 similar to UniRef100_A7P334 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 564

 Score = 58.0 bits (29), Expect = 3e-07
 Identities = 112/137 (81%), Gaps = 2/137 (1%)
 Strand = Plus / Plus

                                                                       
Query: 191 tagcatttcaaagcatagggatcatatatggggacataggaacttctcccttatatgtgt 250
           ||||||||||||||||||||||| | ||||| || || || || |||||  | |||||||
Sbjct: 251 tagcatttcaaagcatagggatcgtgtatggtgatattggtacatctccactttatgtgt 310

                                                                       
Query: 251 atgatagcaccttcactgatggcatcgacaacactcatgaccttcttgga-tgcttgtca 309
           |||  ||||| |||||||||   || || |||| | ||||| |||||||| | ||| || 
Sbjct: 311 atgcaagcactttcactgataaaatagaaaacaatgatgacattcttggagttctt-tct 369

                            
Query: 310 ctcatcatctataccat 326
           |||||||||||||||||
Sbjct: 370 ctcatcatctataccat 386


>gnl|LJGI|GO035471 similar to UniRef100_A7P334 Cluster: Chromosome chr1 scaffold_5,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_5, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (6%)
          Length = 146

 Score = 56.0 bits (28), Expect = 1e-06
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                    
Query: 1610 agaggtacatgtttgagctcaagaacaaggtttctagtga 1649
            |||||||||||||||||||  | |||||||||||||||||
Sbjct: 19   agaggtacatgtttgagctagaaaacaaggtttctagtga 58