Miyakogusa Predicted Gene

Lj4g3v2630940.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2630940.1 Non Chatacterized Hit- tr|G7L816|G7L816_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,76.04,0,ATP-DEPENDENT PROTEASE (CEREBLON),NULL;
TauE,Transmembrane protein TauE like; seg,NULL,CUFF.51408.1
         (1242 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67669 similar to UniRef100_A7P5B8 Cluster: Chromosome...    52   8e-06

>gnl|LJGI|TC67669 similar to UniRef100_A7P5B8 Cluster: Chromosome chr4 scaffold_6,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_6, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (28%)
          Length = 620

 Score = 52.0 bits (26), Expect = 8e-06
 Identities = 77/94 (81%)
 Strand = Plus / Plus

                                                                        
Query: 908  caagtgctacatccacttttacaatgacattttctgcatctatgtcagtggtggaatatt 967
            ||||||| ||| ||||||||  ||||||||| || |||||||| || || ||  ||||||
Sbjct: 143  caagtgccacagccacttttggaatgacattctcagcatctatatctgttgtacaatatt 202

                                              
Query: 968  accttctgaaacgttttcctcttccttatgctct 1001
            |||| || || || |||||| | |||||||||||
Sbjct: 203  acctcctaaatcgatttcctgtgccttatgctct 236