Miyakogusa Predicted Gene
- Lj4g3v2628750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2628750.1 tr|G7L803|G7L803_MEDTR Exonuclease OS=Medicago
truncatula GN=MTR_8g087940 PE=4 SV=1,69.17,0,seg,NULL; XPG_1,XPG
conserved site; XPGRADSUPER,DNA repair protein (XPGC)/yeast Rad;
Xeroderma pigme,CUFF.51368.1
(2091 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60224 similar to UniRef100_A5Y728 Cluster: Exonucleas... 1403 0.0
gnl|LJGI|FS340480 similar to UniRef100_A5Y728 Cluster: Exonuclea... 1372 0.0
gnl|LJGI|BP043150 similar to UniRef100_Q60GC1 Cluster: Exonuclea... 605 e-172
>gnl|LJGI|TC60224 similar to UniRef100_A5Y728 Cluster: Exonuclease; n=1; Cucumis
melo|Rep: Exonuclease - Cucumis melo (Muskmelon),
partial (70%)
Length = 744
Score = 1403 bits (708), Expect = 0.0
Identities = 708/708 (100%)
Strand = Plus / Plus
Query: 1 atggggattcaaggtctattaccgcaattgaaatcgattatggtcccaatccacatcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 atggggattcaaggtctattaccgcaattgaaatcgattatggtcccaatccacatcaag 96
Query: 61 gaattgaacggttgttctgtggcggtagacacctattcttggctccacaaaggtgcctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 gaattgaacggttgttctgtggcggtagacacctattcttggctccacaaaggtgcctta 156
Query: 121 tcttgcagcactgagctctgcaaagggatacccacaaccaggcatattgagtattgcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tcttgcagcactgagctctgcaaagggatacccacaaccaggcatattgagtattgcatg 216
Query: 181 cgtaaagtgaacttgctgcgccactacggtgttgagccgattctagtatttgatggaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 cgtaaagtgaacttgctgcgccactacggtgttgagccgattctagtatttgatggaggt 276
Query: 241 cttttacccatgaagagtgaacaagagaacaagcgtgccagggctagaaaggataatttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cttttacccatgaagagtgaacaagagaacaagcgtgccagggctagaaaggataatttt 336
Query: 301 gcacgcgcaattgaacatgagtctgatggaaattctactgctgccttccattgctaccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gcacgcgcaattgaacatgagtctgatggaaattctactgctgccttccattgctaccag 396
Query: 361 aaagctgttgatatttcacctctaattgcgcatgaactcattcaggtgttgaagcaagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aaagctgttgatatttcacctctaattgcgcatgaactcattcaggtgttgaagcaagag 456
Query: 421 aatttacagtatattgttgctccttacgaagcagatgcccagatgacattcttggcaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aatttacagtatattgttgctccttacgaagcagatgcccagatgacattcttggcaatt 516
Query: 481 agcagacaggttgatgcagttataactgaagactctgatcttataccatttggttgtcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 agcagacaggttgatgcagttataactgaagactctgatcttataccatttggttgtcca 576
Query: 541 agaattatctttaaaatggaccagtttggccaaggtgttcagtttcaatattccatgctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 agaattatctttaaaatggaccagtttggccaaggtgttcagtttcaatattccatgctg 636
Query: 601 caaaataataaggagcttagttttgaagggttcaacagacaaatgcttcttgaaatgtgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 caaaataataaggagcttagttttgaagggttcaacagacaaatgcttcttgaaatgtgt 696
Query: 661 attttgagcggctgtgattatcttcagtcattgccagggatgggtctc 708
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 attttgagcggctgtgattatcttcagtcattgccagggatgggtctc 744
>gnl|LJGI|FS340480 similar to UniRef100_A5Y728 Cluster: Exonuclease; n=1; Cucumis
melo|Rep: Exonuclease - Cucumis melo (Muskmelon),
partial (69%)
Length = 767
Score = 1372 bits (692), Expect = 0.0
Identities = 695/696 (99%)
Strand = Plus / Plus
Query: 1 atggggattcaaggtctattaccgcaattgaaatcgattatggtcccaatccacatcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atggggattcaaggtctattaccgcaattgaaatcgattatggtcccaatccacatcaag 131
Query: 61 gaattgaacggttgttctgtggcggtagacacctattcttggctccacaaaggtgcctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gaattgaacggttgttctgtggcggtagacacctattcttggctccacaaaggtgcctta 191
Query: 121 tcttgcagcactgagctctgcaaagggatacccacaaccaggcatattgagtattgcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tcttgcagcactgagctctgcaaagggatacccacaaccaggcatattgagtattgcatg 251
Query: 181 cgtaaagtgaacttgctgcgccactacggtgttgagccgattctagtatttgatggaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cgtaaagtgaacttgctgcgccactacggtgttgagccgattctagtatttgatggaggt 311
Query: 241 cttttacccatgaagagtgaacaagagaacaagcgtgccagggctagaaaggataatttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cttttacccatgaagagtgaacaagagaacaagcgtgccagggctagaaaggataatttt 371
Query: 301 gcacgcgcaattgaacatgagtctgatggaaattctactgctgccttccattgctaccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gcacgcgcaattgaacatgagtctgatggaaattctactgctgccttccattgctaccag 431
Query: 361 aaagctgttgatatttcacctctaattgcgcatgaactcattcaggtgttgaagcaagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aaagctgttgatatttcacctctaattgcgcatgaactcattcaggtgttgaagcaagag 491
Query: 421 aatttacagtatattgttgctccttacgaagcagatgcccagatgacattcttggcaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aatttacagtatattgttgctccttacgaagcagatgcccagatgacattcttggcaatt 551
Query: 481 agcagacaggttgatgcagttataactgaagactctgatcttataccatttggttgtcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 agcagacaggttgatgcagttataactgaagactctgatcttataccatttggttgtcca 611
Query: 541 agaattatctttaaaatggaccagtttggccaaggtgttcagtttcaatattccatgctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 agaattatctttaaaatggaccagtttggccaaggtgttcagtttcaatattccatgctg 671
Query: 601 caaaataataaggagcttagttttgaagggttcaacagacaaatgcttcttgaaatgtgt 660
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 cagaataataaggagcttagttttgaagggttcaacagacaaatgcttcttgaaatgtgt 731
Query: 661 attttgagcggctgtgattatcttcagtcattgcca 696
||||||||||||||||||||||||||||||||||||
Sbjct: 732 attttgagcggctgtgattatcttcagtcattgcca 767
>gnl|LJGI|BP043150 similar to UniRef100_Q60GC1 Cluster: Exonuclease 1; n=1; Oryza sativa
Japonica Group|Rep: Exonuclease 1 - Oryza sativa subsp.
japonica (Rice), partial (6%)
Length = 495
Score = 605 bits (305), Expect = e-172
Identities = 305/305 (100%)
Strand = Plus / Minus
Query: 1787 acaatggtttctgtgatgacaaagttgatggaccatttgcagaaaggagtgctgaagaag 1846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 acaatggtttctgtgatgacaaagttgatggaccatttgcagaaaggagtgctgaagaag 436
Query: 1847 aaaaatttgggacaactatttcccatttaagccattattctcaaatagctgagaagtcta 1906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aaaaatttgggacaactatttcccatttaagccattattctcaaatagctgagaagtcta 376
Query: 1907 tggatagatttgaatctgtgatatcgtcctttagatgttcttctggttctcgtgtcagcg 1966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tggatagatttgaatctgtgatatcgtcctttagatgttcttctggttctcgtgtcagcg 316
Query: 1967 gtctcagggctcctctaaaagatgttcggaatacttgtaataataggccaacaactgtgg 2026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gtctcagggctcctctaaaagatgttcggaatacttgtaataataggccaacaactgtgg 256
Query: 2027 acttaaagcaatatgcgtatgtgccaaaacaaaggaagaaaagcagaatagctcctggga 2086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 acttaaagcaatatgcgtatgtgccaaaacaaaggaagaaaagcagaatagctcctggga 196
Query: 2087 attaa 2091
|||||
Sbjct: 195 attaa 191