Miyakogusa Predicted Gene
- Lj4g3v2628690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2628690.1 tr|Q533S0|Q533S0_LOTJA MADS box protein AGb
(Fragment) OS=Lotus japonicus PE=2 SV=1,99.12,0,seg,NULL;
coiled-coil,NULL; K-box,Transcription factor, K-box;
SRF-TF,Transcription factor, MADS-box,CUFF.51361.1
(747 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75483 UniRef100_Q533S0 Cluster: MADS box protein AGb;... 1334 0.0
gnl|LJGI|TC67825 UniRef100_Q533S1 Cluster: MADS box protein AGa;... 545 e-154
gnl|LJGI|TC65119 homologue to UniRef100_Q533R9 Cluster: MADS box... 159 3e-38
gnl|LJGI|TC57459 UniRef100_Q533R8 Cluster: MADS box protein AGL1... 157 1e-37
>gnl|LJGI|TC75483 UniRef100_Q533S0 Cluster: MADS box protein AGb; n=1; Lotus
japonicus|Rep: MADS box protein AGb - Lotus japonicus,
complete
Length = 960
Score = 1334 bits (673), Expect = 0.0
Identities = 688/693 (99%)
Strand = Plus / Plus
Query: 55 ggaagggggaagattgagatcaagcggattgagaacacaaccaatcgccaagtaaccttc 114
||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaagagggaaaatggagatcaagcggattgagaacacaaccaatcgccaagtaaccttc 60
Query: 115 tgcaaacgcagaaatgggttgcttaagaaggcatatgagttatctgtgctttgtgatgca 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcaaacgcagaaatgggttgcttaagaaggcatatgagttatctgtgctttgtgatgca 120
Query: 175 gaagtggctctcatagtcttctcaaaccgtggccgcctctatgaatatgcaaataacagt 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaagtggctctcatagtcttctcaaaccgtggccgcctctatgaatatgcaaataacagt 180
Query: 235 gtcaaagcatctattgagaggtacaagaaagcatgttcagattcttctggaggtggatcc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcaaagcatctattgagaggtacaagaaagcatgttcagattcttctggaggtggatcc 240
Query: 295 acttctggggctaatgctcagttttaccagcaagaagctgccaaactgcgtgtccaaatc 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acttctggggctaatgctcagttttaccagcaagaagctgccaaactgcgtgtccaaatc 300
Query: 355 agtaacctgcagaatcacaacaggcaaatgctgggtgaggctttgagcaacatgaatgcc 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtaacctgcagaatcacaacaggcaaatgctgggtgaggctttgagcaacatgaatgcc 360
Query: 415 agggatctcaaaaaccttgagacaaaattagaaaaaggaattagcagaattcgatccaag 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agggatctcaaaaaccttgagacaaaattagaaaaaggaattagcagaattcgatccaag 420
Query: 475 aagaacgagatgctatttgcagaaatcgagtatatgcagaaaagggagatagacttgcat 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagaacgagatgctatttgcagaaatcgagtatatgcagaaaagggagatagacttgcat 480
Query: 535 aatagcaatcagcttcttagagcaaagatagcagaaagtgatgagaggaagaaccataac 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatagcaatcagcttcttagagcaaagatagcagaaagtgatgagaggaagaaccataac 540
Query: 595 tttaacatgttgcctggaaccacaaactttgaatctctgcagcaatctcagcagcccttt 654
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 541 tttaacatgttgcctggaaccacaaactttgaatctctgcagcaatctcagcaacccttt 600
Query: 655 gattctcgcggtttcttccaagtgactggattacaacccaataacaatcagtgtgcaagg 714
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gattctcgcggttccttccaagtgactggattacaacccaataacaatcagtgtgcaagg 660
Query: 715 caagaccagatctcacttcaatttgtttgatgt 747
|||||||||||||||||||||||||||||||||
Sbjct: 661 caagaccagatctcacttcaatttgtttgatgt 693
>gnl|LJGI|TC67825 UniRef100_Q533S1 Cluster: MADS box protein AGa; n=1; Lotus
japonicus|Rep: MADS box protein AGa - Lotus japonicus,
complete
Length = 1152
Score = 545 bits (275), Expect = e-154
Identities = 493/566 (87%), Gaps = 6/566 (1%)
Strand = Plus / Plus
Query: 10 ccaaaccaatccatgtcagctaataattctcctcagaggaagatgggaagggggaagatt 69
||||||||||||||||||| ||||||| ||||| ||| |||||||||||||||||
Sbjct: 38 ccaaaccaatccatgtcag------attctccacagagaaagctgggaagggggaagatt 91
Query: 70 gagatcaagcggattgagaacacaaccaatcgccaagtaaccttctgcaaacgcagaaat 129
||||||||| ||||||||||||| |||||||||||||| || |||||||| |||||||||
Sbjct: 92 gagatcaagaggattgagaacaccaccaatcgccaagtcactttctgcaagcgcagaaat 151
Query: 130 gggttgcttaagaaggcatatgagttatctgtgctttgtgatgcagaagtggctctcata 189
|| | |||||||| || |||||| |||||||||||||||||||||| || ||| | ||
Sbjct: 152 ggccttcttaagaaagcttatgagctatctgtgctttgtgatgcagaggttgctttgatt 211
Query: 190 gtcttctcaaaccgtggccgcctctatgaatatgcaaataacagtgtcaaagcatctatt 249
|||||||| | ||| || ||||||||||||||||| |||||||||||||||||| | |||
Sbjct: 212 gtcttctctagccgcggtcgcctctatgaatatgctaataacagtgtcaaagcaacaatt 271
Query: 250 gagaggtacaagaaagcatgttcagattcttctggaggtggatccacttctggggctaat 309
|| |||||||||||||||||||||||||| ||||| | |||||| |||||| |||||||
Sbjct: 272 gataggtacaagaaagcatgttcagattcatctggggctggatctgcttctgaggctaat 331
Query: 310 gctcagttttaccagcaagaagctgccaaactgcgtgtccaaatcagtaacctgcagaat 369
||||||||||| |||||||| || | |||||||||||| ||||| |||||||||||||||
Sbjct: 332 gctcagttttatcagcaagaggcagacaaactgcgtgtgcaaattagtaacctgcagaat 391
Query: 370 cacaacaggcaaatgctgggtgaggctttgagcaacatgaatgccagggatctcaaaaac 429
|||||||||||||| |||||||| ||||| || |||||||||| ||| |||||||||
Sbjct: 392 aacaacaggcaaatgatgggtgagtctttgggctctatgaatgccaaggaactcaaaaac 451
Query: 430 cttgagacaaaattagaaaaaggaattagcagaattcgatccaagaagaacgagatgcta 489
|| ||||| || ||||||||||||||||| || ||||| ||||| ||||| ||| | |||
Sbjct: 452 ctggagactaagttagaaaaaggaattagtaggattcgttccaaaaagaatgagctacta 511
Query: 490 tttgcagaaatcgagtatatgcagaaaagggagatagacttgcataatagcaatcagctt 549
||||| ||||| ||||| |||||||||||||||||||||||||| |||| ||| ||||||
Sbjct: 512 tttgctgaaattgagtacatgcagaaaagggagatagacttgcacaataacaaccagctt 571
Query: 550 cttagagcaaagatagcagaaagtga 575
||| | ||||||||||| ||||||||
Sbjct: 572 cttcgggcaaagatagctgaaagtga 597
>gnl|LJGI|TC65119 homologue to UniRef100_Q533R9 Cluster: MADS box protein AGL1; n=1;
Lotus japonicus|Rep: MADS box protein AGL1 - Lotus
japonicus, complete
Length = 1053
Score = 159 bits (80), Expect = 3e-38
Identities = 198/236 (83%), Gaps = 1/236 (0%)
Strand = Plus / Plus
Query: 36 ttctcctcagaggaagatgggaagggggaa-gattgagatcaagcggattgagaacacaa 94
|||| |||||| |||||||||||| ||||| ||| |||||||||||||| |||||||| |
Sbjct: 76 ttcttctcagaagaagatgggaagagggaaagatggagatcaagcggatcgagaacacca 135
Query: 95 ccaatcgccaagtaaccttctgcaaacgcagaaatgggttgcttaagaaggcatatgagt 154
| ||| | ||||| ||||||||||| ||| | || || ||||| ||| | || ||||||
Sbjct: 136 caaataggcaagtcaccttctgcaagcgccgcaacggtttgctgaaggaagcttatgagc 195
Query: 155 tatctgtgctttgtgatgcagaagtggctctcatagtcttctcaaaccgtggccgcctct 214
||||||| || |||||||| ||||| |||||||| |||||||||| |||||||||| | |
Sbjct: 196 tatctgttctgtgtgatgctgaagttgctctcattgtcttctcaagccgtggccgcttgt 255
Query: 215 atgaatatgcaaataacagtgtcaaagcatctattgagaggtacaagaaagcatgt 270
|||| ||||| || |||||||| | || | | ||||| ||||||||||||||||||
Sbjct: 256 atgagtatgccaacaacagtgttagaggaaccattgataggtacaagaaagcatgt 311
>gnl|LJGI|TC57459 UniRef100_Q533R8 Cluster: MADS box protein AGL11; n=1; Lotus
japonicus|Rep: MADS box protein AGL11 - Lotus japonicus,
complete
Length = 983
Score = 157 bits (79), Expect = 1e-37
Identities = 157/183 (85%)
Strand = Plus / Plus
Query: 50 agatgggaagggggaagattgagatcaagcggattgagaacacaaccaatcgccaagtaa 109
||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| || |
Sbjct: 82 agatggggagggggaagattgagatcaagaggattgagaacacaactaatcgccaggtga 141
Query: 110 ccttctgcaaacgcagaaatgggttgcttaagaaggcatatgagttatctgtgctttgtg 169
| |||||||| | ||||| ||| | || ||||| || |||||| |||| ||||| ||||
Sbjct: 142 cattctgcaagagaagaaacgggcttctgaagaaagcttatgagctatcagtgctgtgtg 201
Query: 170 atgcagaagtggctctcatagtcttctcaaaccgtggccgcctctatgaatatgcaaata 229
|||| ||||| || ||||| |||||||| | |||||||||||||||||||||| |||| |
Sbjct: 202 atgctgaagttgccctcattgtcttctccagccgtggccgcctctatgaatattcaaaca 261
Query: 230 aca 232
|||
Sbjct: 262 aca 264