Miyakogusa Predicted Gene

Lj4g3v2618560.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2618560.1 tr|A9SN34|A9SN34_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,34.75,3e-18,seg,NULL; BERNARDINELLI-SEIP CONGENITAL
LIPODYSTROPHY 2 HOMOLOG (BSCL2 PROTEIN),NULL;
Seipin,Adipose,CUFF.51351.1
         (1668 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|CN825659 weakly similar to UniRef100_A7QDF0 Cluster: Ch...   815   0.0  

>gnl|LJGI|CN825659 weakly similar to UniRef100_A7QDF0 Cluster: Chromosome chr10
            scaffold_81, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr10 scaffold_81, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (12%)
          Length = 424

 Score =  815 bits (411), Expect = 0.0
 Identities = 421/423 (99%), Gaps = 1/423 (0%)
 Strand = Plus / Plus

                                                                        
Query: 603  gcttgaatttgtggcggggttggtgattagggtaatcatgatgcaaatcaaggttttcat 662
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    gcttgaatttgtggcggggttggtgattagggtaatcatgatgcaaatcaaggttttcat 61

                                                                        
Query: 663  tttctttgtgaagtcaccagtgttgttattgtttcatggttgcatgtttt-ttgtggacc 721
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 62   tttctttgtgaagtcaccagtgttgttattgtttcatggttgcatgtttttttgtggacc 121

                                                                        
Query: 722  cttttggaacaattagaaaggggaagagttttttcatggagattttggatagagtgtggg 781
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  cttttggaacaattagaaaggggaagagttttttcatggagattttggatagagtgtggg 181

                                                                        
Query: 782  gttgtgtttcagctcagggattgttcagtgagcagaattcattctggaatgttgctttta 841
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  gttgtgtttcagctcagggattgttcagtgagcagaattcattctggaatgttgctttta 241

                                                                        
Query: 842  ggtgtgggtggggatttttgtggtctatctatgtttgctgcattttgtttggtctattgg 901
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  ggtgtgggtggggatttttgtggtctatctatgtttgctgcattttgtttggtctattgg 301

                                                                        
Query: 902  gttcttcagttttggttagtgggtttgtgatgaagtacttggtggagaagccacttcaga 961
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  gttcttcagttgtggttagtgggtttgtgatgaagtacttggtggagaagccacttcaga 361

                                                                        
Query: 962  tgaagcaggttttgaattttgatttcaccaagcaaagtcctgttgcatttgtgcctgtga 1021
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362  tgaagcaggttttgaattttgatttcaccaagcaaagtcctgttgcatttgtgcctgtga 421

               
Query: 1022 tat 1024
            |||
Sbjct: 422  tat 424