Miyakogusa Predicted Gene
- Lj4g3v2605950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2605950.1 Non Chatacterized Hit- tr|G5AB42|G5AB42_PHYSP
Putative uncharacterized protein OS=Phytophthora sojae,27.24,9e-19,no
description,WD40/YVTN repeat-like-containing domain; WD40,WD40 repeat;
WD40 repeats,WD40 repeat;
,NODE_77264_length_1426_cov_26.746845.path2.1
(966 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58758 weakly similar to UniRef100_UPI0000162829 Clust... 1098 0.0
gnl|LJGI|TC80373 similar to UniRef100_A7QDH3 Cluster: Chromosome... 244 9e-64
gnl|LJGI|FS338888 weakly similar to UniRef100_O81895 Cluster: Ma... 105 5e-22
gnl|LJGI|GO010241 weakly similar to UniRef100_O81895 Cluster: Ma... 105 5e-22
>gnl|LJGI|TC58758 weakly similar to UniRef100_UPI0000162829 Cluster: transducin
family protein / WD-40 repeat family protein; n=1;
Arabidopsis thaliana|Rep: transducin family protein /
WD-40 repeat family protein - Arabidopsis thaliana,
partial (49%)
Length = 804
Score = 1098 bits (554), Expect = 0.0
Identities = 554/554 (100%)
Strand = Plus / Plus
Query: 1 atggatgttagcaccgaagccgtggtgtccctgtgtttcaagccagggaaggaagataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atggatgttagcaccgaagccgtggtgtccctgtgtttcaagccagggaaggaagataat 310
Query: 61 atctatgtctcatcgggaaaggaaatcaattgtttcgatgtgcgcttggccaccgccaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atctatgtctcatcgggaaaggaaatcaattgtttcgatgtgcgcttggccaccgccaaa 370
Query: 121 tgggagccattggagagttataattataacaaagaggagataaacaaggttacatgtaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgggagccattggagagttataattataacaaagaggagataaacaaggttacatgtaat 430
Query: 181 tcaaggtcctcatttcttgctgctgcagatgatagtggtgaagtgaagataattgacatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tcaaggtcctcatttcttgctgctgcagatgatagtggtgaagtgaagataattgacatt 490
Query: 241 cgccagcaatgcttgcacaaaacactacgagctggtcatacaagtatatgttcctcagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cgccagcaatgcttgcacaaaacactacgagctggtcatacaagtatatgttcctcagtg 550
Query: 301 gaattccttccttggagatcctgggaagtaattagtggaggtcttgattcagcacttgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gaattccttccttggagatcctgggaagtaattagtggaggtcttgattcagcacttgta 610
Query: 361 tggtgggacttctccaatgggcgccacaacaaaatagcaaattttggtaatgtcagtagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tggtgggacttctccaatgggcgccacaacaaaatagcaaattttggtaatgtcagtagc 670
Query: 421 agcaatgctggacagtgttacaatccttctttcattcatgcaatagctgttccagaaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 agcaatgctggacagtgttacaatccttctttcattcatgcaatagctgttccagaaact 730
Query: 481 gacatgatagataaattagacaagatatgtgcggttgcagcgggtgcagttgttaatgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gacatgatagataaattagacaagatatgtgcggttgcagcgggtgcagttgttaatgtg 790
Query: 541 attaatattgaagc 554
||||||||||||||
Sbjct: 791 attaatattgaagc 804
>gnl|LJGI|TC80373 similar to UniRef100_A7QDH3 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 496
Score = 244 bits (123), Expect = 9e-64
Identities = 126/127 (99%)
Strand = Plus / Plus
Query: 840 tgatatcctacatttgaacatcggcgtaccccaaaaagtcaattgtctctgtaccaccac 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatatcctacatttgaacatcggcgtaccccaaaaagtcaattgtctctgtaccaccac 60
Query: 900 agctgatacagacaatcttgttgtgtgtgacacatctaaaaccgtgaaggtctattctgt 959
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 agctgatacagacaatcttgttgtgtgtgacacatctaaaaccgtgaaggtgtattctgt 120
Query: 960 aacatag 966
|||||||
Sbjct: 121 aacatag 127
>gnl|LJGI|FS338888 weakly similar to UniRef100_O81895 Cluster: Male sterility 2-like
protein; n=2; Arabidopsis thaliana|Rep: Male sterility
2-like protein - Arabidopsis thaliana (Mouse-ear cress),
partial (11%)
Length = 792
Score = 105 bits (53), Expect = 5e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 108 ggccaccgccaaatgggagccattggagagttataattataacaaagaggagataaacaa 167
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ggccaccatcaaatgggagccattggagagttataattataacaaagaggagataaacaa 482
Query: 168 g 168
|
Sbjct: 483 g 483
>gnl|LJGI|GO010241 weakly similar to UniRef100_O81895 Cluster: Male sterility 2-like
protein; n=2; Arabidopsis thaliana|Rep: Male sterility
2-like protein - Arabidopsis thaliana (Mouse-ear cress),
partial (11%)
Length = 778
Score = 105 bits (53), Expect = 5e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 108 ggccaccgccaaatgggagccattggagagttataattataacaaagaggagataaacaa 167
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggccaccatcaaatgggagccattggagagttataattataacaaagaggagataaacaa 452
Query: 168 g 168
|
Sbjct: 453 g 453