Miyakogusa Predicted Gene
- Lj4g3v2605900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2605900.1 Non Chatacterized Hit- tr|I1KSF7|I1KSF7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13726
PE,90,2e-18,Cellulose_synt,Cellulose synthase; CELLULOSE
SYNTHASE-RELATED,NULL; X-BOX TRANSCRIPTION FACTOR-RELAT,CUFF.51508.1
(537 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV416600 similar to UniRef100_P93155 Cluster: Cellulose... 628 e-180
gnl|LJGI|TC58598 homologue to UniRef100_P93155 Cluster: Cellulos... 436 e-122
gnl|LJGI|BP085617 94 1e-18
gnl|LJGI|TC78160 homologue to UniRef100_Q9SWW6 Cluster: Cellulos... 86 3e-16
gnl|LJGI|TC66056 homologue to UniRef100_A7Q2A3 Cluster: Chromoso... 76 2e-13
gnl|LJGI|TC76091 homologue to UniRef100_A7Q1M3 Cluster: Chromoso... 60 1e-08
gnl|LJGI|TC77039 homologue to UniRef100_A7Q2A3 Cluster: Chromoso... 56 2e-07
gnl|LJGI|TC59037 homologue to UniRef100_Q8H2C6 Cluster: Cellulos... 56 2e-07
>gnl|LJGI|AV416600 similar to UniRef100_P93155 Cluster: Cellulose synthase; n=3;
Gossypium|Rep: Cellulose synthase - Gossypium hirsutum
(Upland cotton) (Gossypium mexicanum), partial (13%)
Length = 378
Score = 628 bits (317), Expect = e-180
Identities = 317/317 (100%)
Strand = Plus / Plus
Query: 1 atgactagtgtgcttgagcttcgctggagcggtgttagcatcgaggatttgtggcgtaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atgactagtgtgcttgagcttcgctggagcggtgttagcatcgaggatttgtggcgtaac 121
Query: 61 gagcagttctgggtgattggaggtgtctcagcacatttgtttgcagtcttccaaggattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gagcagttctgggtgattggaggtgtctcagcacatttgtttgcagtcttccaaggattg 181
Query: 121 ctcaagatgttggctggtgttgatactaacttcaccgtcacggccaaggccgctgaggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctcaagatgttggctggtgttgatactaacttcaccgtcacggccaaggccgctgaggac 241
Query: 181 ggcgagtttggtgatctttacattgtgaagtggacaactctcttgattcctccaacaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggcgagtttggtgatctttacattgtgaagtggacaactctcttgattcctccaacaacc 301
Query: 241 ctcatcgttgttaacatggttggtgttgttgctggattctctgatgcactgaatggagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctcatcgttgttaacatggttggtgttgttgctggattctctgatgcactgaatggagga 361
Query: 301 tatgagtcatggggacc 317
|||||||||||||||||
Sbjct: 362 tatgagtcatggggacc 378
>gnl|LJGI|TC58598 homologue to UniRef100_P93155 Cluster: Cellulose synthase; n=3;
Gossypium|Rep: Cellulose synthase - Gossypium hirsutum
(Upland cotton) (Gossypium mexicanum), partial (34%)
Length = 1252
Score = 436 bits (220), Expect = e-122
Identities = 427/496 (86%)
Strand = Plus / Plus
Query: 4 actagtgtgcttgagcttcgctggagcggtgttagcatcgaggatttgtggcgtaacgag 63
||||||||||||||||| || ||||||||||| | |||| | ||||||||||| ||||||
Sbjct: 470 actagtgtgcttgagctgcggtggagcggtgtaaccatccaagatttgtggcgaaacgag 529
Query: 64 cagttctgggtgattggaggtgtctcagcacatttgtttgcagtcttccaaggattgctc 123
||||||||||||||||||||||| ||||| ||| | || || |||||||||||||| ||
Sbjct: 530 cagttctgggtgattggaggtgtttcagctcatctcttcgccgtcttccaaggattccta 589
Query: 124 aagatgttggctggtgttgatactaacttcaccgtcacggccaaggccgctgaggacggc 183
|||||||| || |||||||| || |||||||| ||||| |||| | ||||| || |
Sbjct: 590 aagatgtttgcaggtgttgacaccaacttcacagtcacttccaaatctgctgatgatgca 649
Query: 184 gagtttggtgatctttacattgtgaagtggacaactctcttgattcctccaacaaccctc 243
||||||||||| || ||||| | || ||||| || || ||||||||||| || |||||
Sbjct: 650 gagtttggtgaactatacatcatcaaatggactacacttttgattcctccgacgaccctt 709
Query: 244 atcgttgttaacatggttggtgttgttgctggattctctgatgcactgaatggaggatat 303
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 710 atcgttgttaacatggttggtgttgttgctggattttctgatgcactcaatggaggatat 769
Query: 304 gagtcatggggaccactctttgggaaggtgttctttgccttctgggtgatttttcacctc 363
|| || |||||||||||| |||| || || |||||||||||||||||||||||||| |||
Sbjct: 770 gaatcttggggaccactcattggaaaagttttctttgccttctgggtgatttttcatctc 829
Query: 364 tatccattcctcaagggtctcatgggtcgccaaaacagaactcccaccattgttattctc 423
||||| |||||||| ||||||||||||||||| ||| | ||||| ||| | ||||||||
Sbjct: 830 tatcccttcctcaaaggtctcatgggtcgccagaaccgtactccaaccgtggttattctg 889
Query: 424 tggtcagtgttgctggcctctgtcttctcaatgatttgggtcaagatagatccatttgtg 483
||||||||| | ||||||||||||||||| | ||||||| ||||| ||||||||||||
Sbjct: 890 tggtcagtgcttctggcctctgtcttctcccttgtttgggttaagattgatccatttgtg 949
Query: 484 aacaaagttgacagtg 499
| |||||||||||||
Sbjct: 950 agtaaagttgacagtg 965
>gnl|LJGI|BP085617
Length = 453
Score = 93.7 bits (47), Expect = 1e-18
Identities = 47/47 (100%)
Strand = Plus / Minus
Query: 491 ttgacagtgaaaccattgctgaggcatgtgttgctatagattgttaa 537
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttgacagtgaaaccattgctgaggcatgtgttgctatagattgttaa 407
>gnl|LJGI|TC78160 homologue to UniRef100_Q9SWW6 Cluster: Cellulose synthase A
catalytic subunit 7 [UDP-forming]; n=1; Arabidopsis
thaliana|Rep: Cellulose synthase A catalytic subunit 7
[UDP-forming] - Arabidopsis thaliana (Mouse-ear cress),
partial (20%)
Length = 944
Score = 85.7 bits (43), Expect = 3e-16
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 310 tggggaccactctttgggaaggtgttctttgccttctgggtgatttttcacctctatcca 369
||||||||||| ||||||||| | |||||| |||||||||||||| | || |||||||||
Sbjct: 409 tggggaccactatttgggaagctcttcttttccttctgggtgattgtccatctctatcca 468
Query: 370 ttcctcaagggtctcatgggtcg 392
|||||||| ||| | ||||||||
Sbjct: 469 ttcctcaaaggtttgatgggtcg 491
>gnl|LJGI|TC66056 homologue to UniRef100_A7Q2A3 Cluster: Chromosome chr13
scaffold_45, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_45, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 1092
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 307 tcatggggaccactctttgggaaggtgttctttgccttctgggtgatttttcacctctat 366
|||||||| || |||||||| ||| | |||||||| || ||||||||| | || |||||
Sbjct: 539 tcatggggtcccctctttggtaagcttttctttgcattttgggtgattgtccatctctac 598
Query: 367 ccattcctcaagggtctcatgggtcgccaaaacagaactcccaccattgt 416
|| ||||||| ||||||||||| ||||| |||||||| || ||||||||
Sbjct: 599 cccttcctcagaggtctcatgggacgccagaacagaacaccaaccattgt 648
>gnl|LJGI|TC76091 homologue to UniRef100_A7Q1M3 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1339
Score = 60.0 bits (30), Expect = 1e-08
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 307 tcatggggaccactctttgggaaggtgttctttgccttctgggtgatttttcacctctat 366
||||||||||| | ||||||||| | || |||||||||||||| ||| |||| | ||
Sbjct: 794 tcatggggacctttatttgggaagctattttttgccttctgggtcattgttcatttacat 853
Query: 367 ccattcctcaagggtctcatgggtcgccaaaacagaactcccaccattgt 416
|| |||||||| ||||||||||| |||||||| ||||| ||||||||
Sbjct: 854 cctttcctcaaaggtctcatgggaaagcaaaacaggactcctaccattgt 903
>gnl|LJGI|TC77039 homologue to UniRef100_A7Q2A3 Cluster: Chromosome chr13
scaffold_45, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_45, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 591
Score = 56.0 bits (28), Expect = 2e-07
Identities = 91/112 (81%)
Strand = Plus / Plus
Query: 305 agtcatggggaccactctttgggaaggtgttctttgccttctgggtgatttttcacctct 364
|||||||||| || |||||||| ||| | |||||||| || ||||| || | || ||||
Sbjct: 140 agtcatggggtcccctctttggtaagcttttctttgcattttgggtcatcatccatctct 199
Query: 365 atccattcctcaagggtctcatgggtcgccaaaacagaactcccaccattgt 416
| || |||||||| ||||||||||| || || ||| |||| || ||||||||
Sbjct: 200 accccttcctcaaaggtctcatgggacggcagaaccgaacaccgaccattgt 251
>gnl|LJGI|TC59037 homologue to UniRef100_Q8H2C6 Cluster: Cellulose synthase; n=1;
Populus tremuloides|Rep: Cellulose synthase - Populus
tremuloides (Quaking aspen), partial (26%)
Length = 1037
Score = 56.0 bits (28), Expect = 2e-07
Identities = 91/112 (81%)
Strand = Plus / Plus
Query: 305 agtcatggggaccactctttgggaaggtgttctttgccttctgggtgatttttcacctct 364
|||||||||| || |||||||| ||| | |||||||| || ||||| || | || ||||
Sbjct: 634 agtcatggggtcccctctttggtaagcttttctttgcattttgggtcatcatccatctct 693
Query: 365 atccattcctcaagggtctcatgggtcgccaaaacagaactcccaccattgt 416
| || |||||||| ||||||||||| || || ||| |||| || ||||||||
Sbjct: 694 accccttcctcaaaggtctcatgggacggcagaaccgaacaccgaccattgt 745